From zhoudongyue@mail.dlut.edu.cn Sat Jan 8 03:25:50 2022 From: zhoudongyue@mail.dlut.edu.cn To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Question about fsaverage Date: Sat, 08 Jan 2022 16:25:27 +0800 Message-ID: <1641630326995.wmpo5vcao5mmsj3y21lmshcx@android.mail.163.com> MIME-Version: 1.0 Content-Type: multipart/mixed; boundary="===============0755996530834637650==" --===============0755996530834637650== Content-Type: text/plain; charset="utf-8" Content-Transfer-Encoding: quoted-printable External Email - Use Caution =20


Dear FreeSurfer experts:
I am confused how vertex positi= on is determined.  Is the vertex's position on surface is determined? An= d is the distance between each two vertex the same=EF=BC=9F

Bests=EF= =BC=8C
dongyue



--===============0755996530834637650== Content-Type: text/html Content-Transfer-Encoding: base64 Content-Disposition: attachment; filename="attachment.html" MIME-Version: 1.0 PGJyLz48YnIvPjxici8+PGZvbnQgc3R5bGU9ImZvbnQtc2l6ZToxOHB4OyI+RGVhciBGcmVlU3Vy ZmVyIGV4cGVydHM6PC9mb250PiA8YnIvPjxmb250IHN0eWxlPSJmb250LXNpemU6MThweDsiPkkg PC9mb250PmFtIGNvbmZ1c2VkIGhvdyB2ZXJ0ZXggcG9zaXRpb24gaXMgZGV0ZXJtaW5lZC4gJm5i c3A7SXMgdGhlIHZlcnRleCdzIHBvc2l0aW9uIG9uIHN1cmZhY2UgaXMgZGV0ZXJtaW5lZD8gQW5k IGlzIHRoZSBkaXN0YW5jZSBiZXR3ZWVuIGVhY2ggdHdvIHZlcnRleCB0aGUgc2FtZe+8nzxici8+ PGJyLz5CZXN0c++8jDxici8+ZG9uZ3l1ZTxici8+PGJyLz48YnIvPjxici8+PGh0bWw+CjxoZWFk PgogICAgPG1ldGEgaHR0cC1lcXVpdj0iQ29udGVudC1UeXBlIiBjb250ZW50PSJ0ZXh0L2h0bWw7 IGNoYXJzZXQ9VVRGLTgiPgo8L2hlYWQ+Cjxib2R5PjxwPjxzcGFuIHN0eWxlPSJwYWRkaW5nOiAz cHggMTBweDsgYm9yZGVyLXJhZGl1czogNXB4OyBjb2xvcjogI2ZmZmZmZjsgZm9udC13ZWlnaHQ6 IGJvbGQ7IGRpc3BsYXk6IGlubGluZS1ibG9jazsgYmFja2dyb3VuZC1jb2xvcjogI2ZmMDAwMDsi PiZuYnNwOyZuYnNwOyZuYnNwOyZuYnNwOyZuYnNwOyZuYnNwOyZuYnNwOyZuYnNwO0V4dGVybmFs IEVtYWlsIC0gVXNlIENhdXRpb24mbmJzcDsmbmJzcDsmbmJzcDsmbmJzcDsmbmJzcDsmbmJzcDsm bmJzcDsmbmJzcDs8L3NwYW4+PC9wPjxwPjwvcD4KCjwvYm9keT4KPC9odG1sPg== --===============0755996530834637650==-- From dgreve@mgh.harvard.edu Wed Jan 26 16:12:49 2022 From: "Douglas N. Greve" To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Question about fsaverage Date: Wed, 26 Jan 2022 16:12:41 -0500 Message-ID: In-Reply-To: <1641630326995.wmpo5vcao5mmsj3y21lmshcx@android.mail.163.com> MIME-Version: 1.0 Content-Type: multipart/mixed; boundary="===============8897019158336486260==" --===============8897019158336486260== Content-Type: text/plain; charset="utf-8" Content-Transfer-Encoding: 8bit On 1/8/2022 3:25 AM, zhoudongyue(a)mail.dlut.edu.cn wrote: > > > > Dear FreeSurfer experts: > I am confused how vertex position is determined.  Is the vertex's > position on surface is determined? Each vertex in fsaverage is mapped back to the surfaces of 40 subjects. The xyz for the vertex is the mean of the mni305 coordinates across all subjects. > And is the distance between each two vertex the same? No, depends on the subjects in the average > > Bests, > dongyue > > > >         External Email - Use Caution > > > _______________________________________________ > Freesurfer mailing list > Freesurfer(a)nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer --===============8897019158336486260== Content-Type: text/html Content-Transfer-Encoding: base64 Content-Disposition: attachment; filename="attachment.html" MIME-Version: 1.0 PGh0bWw+PGhlYWQ+CjxtZXRhIGh0dHAtZXF1aXY9IkNvbnRlbnQtVHlwZSIgY29udGVudD0idGV4 dC9odG1sOyBjaGFyc2V0PXV0Zi04Ij4KICA8L2hlYWQ+CiAgPGJvZHkgdGV4dD0iIzAwMDAwMCIg Ymdjb2xvcj0iI0ZGRkZGRiI+CiAgICA8YnI+CiAgICA8YnI+CiAgICA8ZGl2IGNsYXNzPSJtb3ot Y2l0ZS1wcmVmaXgiPk9uIDEvOC8yMDIyIDM6MjUgQU0sCiAgICAgIDxhIGNsYXNzPSJtb3otdHh0 LWxpbmstYWJicmV2aWF0ZWQiIGhyZWY9Im1haWx0bzp6aG91ZG9uZ3l1ZUBtYWlsLmRsdXQuZWR1 LmNuIj56aG91ZG9uZ3l1ZUBtYWlsLmRsdXQuZWR1LmNuPC9hPiB3cm90ZTo8YnI+CiAgICA8L2Rp dj4KICAgIDxibG9ja3F1b3RlIHR5cGU9ImNpdGUiIGNpdGU9Im1pZDoxNjQxNjMwMzI2OTk1Lndt cG81dmNhbzVtbXNqM3kyMWxtc2hjeEBhbmRyb2lkLm1haWwuMTYzLmNvbSI+CiAgICAgIAogICAg ICA8YnI+CiAgICAgIDxicj4KICAgICAgPGJyPgogICAgICA8Zm9udCBzdHlsZT0iZm9udC1zaXpl OjE4cHg7Ij5EZWFyIEZyZWVTdXJmZXIgZXhwZXJ0czo8L2ZvbnQ+IDxicj4KICAgICAgPGZvbnQg c3R5bGU9ImZvbnQtc2l6ZToxOHB4OyI+SSA8L2ZvbnQ+YW0gY29uZnVzZWQgaG93IHZlcnRleAog ICAgICBwb3NpdGlvbiBpcyBkZXRlcm1pbmVkLiAmbmJzcDtJcyB0aGUgdmVydGV4J3MgcG9zaXRp b24gb24gc3VyZmFjZSBpcwogICAgICBkZXRlcm1pbmVkPyA8L2Jsb2NrcXVvdGU+CiAgICBFYWNo IHZlcnRleCBpbiBmc2F2ZXJhZ2UgaXMgbWFwcGVkIGJhY2sgdG8gdGhlIHN1cmZhY2VzIG9mIDQw CiAgICBzdWJqZWN0cy4gVGhlIHh5eiBmb3IgdGhlIHZlcnRleCBpcyB0aGUgbWVhbiBvZiB0aGUg bW5pMzA1CiAgICBjb29yZGluYXRlcyBhY3Jvc3MgYWxsIHN1YmplY3RzLjxicj4KICAgIDxibG9j a3F1b3RlIHR5cGU9ImNpdGUiIGNpdGU9Im1pZDoxNjQxNjMwMzI2OTk1LndtcG81dmNhbzVtbXNq M3kyMWxtc2hjeEBhbmRyb2lkLm1haWwuMTYzLmNvbSI+QW5kCiAgICAgIGlzIHRoZSBkaXN0YW5j ZSBiZXR3ZWVuIGVhY2ggdHdvIHZlcnRleCB0aGUgc2FtZe+8nzxicj4KICAgIDwvYmxvY2txdW90 ZT4KICAgIE5vLCBkZXBlbmRzIG9uIHRoZSBzdWJqZWN0cyBpbiB0aGUgYXZlcmFnZTxicj4KICAg IDxibG9ja3F1b3RlIHR5cGU9ImNpdGUiIGNpdGU9Im1pZDoxNjQxNjMwMzI2OTk1LndtcG81dmNh bzVtbXNqM3kyMWxtc2hjeEBhbmRyb2lkLm1haWwuMTYzLmNvbSI+PGJyPgogICAgICBCZXN0c++8 jDxicj4KICAgICAgZG9uZ3l1ZTxicj4KICAgICAgPGJyPgogICAgICA8YnI+CiAgICAgIDxicj4K ICAgICAgPHA+PHNwYW4gc3R5bGU9InBhZGRpbmc6IDNweCAxMHB4OyBib3JkZXItcmFkaXVzOiA1 cHg7IGNvbG9yOgogICAgICAgICAgI2ZmZmZmZjsgZm9udC13ZWlnaHQ6IGJvbGQ7IGRpc3BsYXk6 IGlubGluZS1ibG9jazsKICAgICAgICAgIGJhY2tncm91bmQtY29sb3I6ICNmZjAwMDA7Ij4mbmJz cDsmbmJzcDsmbmJzcDsmbmJzcDsmbmJzcDsmbmJzcDsmbmJzcDsmbmJzcDtFeHRlcm5hbCBFbWFp bCAtIFVzZQogICAgICAgICAgQ2F1dGlvbiZuYnNwOyZuYnNwOyZuYnNwOyZuYnNwOyZuYnNwOyZu YnNwOyZuYnNwOyZuYnNwOzwvc3Bhbj48L3A+CiAgICAgIDxicj4KICAgICAgPGZpZWxkc2V0IGNs YXNzPSJtb3otbWltZS1hdHRhY2htZW50LWhlYWRlciI+PC9maWVsZHNldD4KICAgICAgPHByZSBj bGFzcz0ibW96LXF1b3RlLXByZSIgd3JhcD0iIj5fX19fX19fX19fX19fX19fX19fX19fX19fX19f X19fX19fX19fX19fX19fX19fXwpGcmVlc3VyZmVyIG1haWxpbmcgbGlzdAo8YSBjbGFzcz0ibW96 LXR4dC1saW5rLWFiYnJldmlhdGVkIiBocmVmPSJtYWlsdG86RnJlZXN1cmZlckBubXIubWdoLmhh cnZhcmQuZWR1Ij5GcmVlc3VyZmVyQG5tci5tZ2guaGFydmFyZC5lZHU8L2E+CjxhIGNsYXNzPSJt b3otdHh0LWxpbmstZnJlZXRleHQiIGhyZWY9Imh0dHBzOi8vbWFpbC5ubXIubWdoLmhhcnZhcmQu ZWR1L21haWxtYW4vbGlzdGluZm8vZnJlZXN1cmZlciI+aHR0cHM6Ly9tYWlsLm5tci5tZ2guaGFy dmFyZC5lZHUvbWFpbG1hbi9saXN0aW5mby9mcmVlc3VyZmVyPC9hPjwvcHJlPgogICAgPC9ibG9j a3F1b3RlPgogICAgPGJyPgogIDwvYm9keT4KPC9odG1sPgo= --===============8897019158336486260==--