From thomas.thesen@med.nyu.edu Tue Mar 15 14:08:46 2011 From: "Thesen, Thomas" To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] V1 prediction Date: Tue, 15 Mar 2011 14:08:39 -0400 Message-ID: MIME-Version: 1.0 Content-Type: multipart/mixed; boundary="===============6343810108267728920==" --===============6343810108267728920== Content-Type: text/plain; charset="utf-8" Content-Transfer-Encoding: quoted-printable Dear Freesurfer List, I ran the script for predicting V1 location on the surface: http://surfer.nmr.mgh.harvard.edu/fswiki/V1 According to the paper, the output should be a probability map, but the scrip= t only seems to produce a label file: $SUBJECT_DIR/label/?h.v1.prob.label . When I load this file (it only loads as 'label') it is a binary label, with n= o probability values associated with it. That means it is a pretty generous d= escription of predicted V1. How can I get probability values and trim it to, let's say, >80% probability? Thanks for your input. Thomas ------------------------------------------------------------
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