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Hi all,

I was trying to run the dev version of FreeSurfer from MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev/ but the content from MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://github.com/freesurfer/freesurfer/tree/dev/mri_histo_util/ERC_bayesian_segmentation is not present in ${FREESURFER_HOME}/python/packages/

As instructed, I've put atlas_full/ and atlas_simplified/ inside ${FREESURFER_HOME}/python/packages/ERC_bayesian_segmentation/ when trying to run mri_histo_atlas_segment_fireants but had to manually create the subdir.

can't open file '/share/apps/freesurfer-dev/python/packages/ERC_bayesian_segmentation//scripts/segment_fireants.py': [Errno 2] No such file or directory

Can the files from ERC_bayesian_segmentation/ in GitHub be manually pulled out into this directory? Which files are required?

Best regards,


Dr Matthieu Chourrout orcid logo 16px

Research Fellow on Correlative X-ray Imaging for the Large-scale Imaging of Neural Circuits

UCL Mechanical Engineering

Materials, Structure and Manufacturing at Harwell (MSMaH)

Rm 4.17 Malet Place Eng. Building, Torrington Place, London, WC1E 7JE

Bloomsbury Campus, University College London