On Thu, Nov 1, 2012 at 2:55 PM, Douglas N Greve <greve@nmr.mgh.harvard.edu> wrote:

The problem is that the fwhm is not-a-number (glmdir/fwhm.dat). Usually this means that there is something messed up with the mask (glmdir/mask.mgh). View the mask to see what is up
tksurfer fsaverage lh inflated -ov glmdir/mask.mgh -fminmax .5 1
doug

On 11/01/2012 02:39 PM, Ryan wrote:

Doug,
Here are the files.

On Thu, Nov 1, 2012 at 2:00 PM, Douglas N Greve <greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>> wrote:

Can you send the command line and attach the files?
thanks
doug

On 11/01/2012 01:11 PM, Ryan wrote:

Doug,
I tried running mri_glmfit-sim without the --bg flag and it
finished in 10 minutes without any errors. This has never
happened before, so I highly suspect these results. Do you
know what could be wrong? In case you need it, the summary
file output and terminal output are attached.

-Ryan

-- Douglas N. Greve, Ph.D.
MGH-NMR Center
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
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-Ryan