Hello team,

As freesurfer takes lot of time for processing one subject, I was searching on how to run recon-all for multiple subjects in parallel and I found the following in Andy's brain book doc

MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://andysbrainbook.readthedocs.io/en/latest/FreeSurfer/FS_ShortCourse/FS_04_ReconAllParallel.html

and ran

$ ls *.nii | parallel --jobs 8 recon-all -s {.} -i {} -all -qcache

and I get the error "/usr/bin/bash: /home/***/***/freesurfer/bin/recon-all: /bin/tcsh: bad interpreter: No such file or directory "

I believe that this is not the right command for linux, ubuntu 20 OS but I am not sure.

Could anyone help me with this?

Thank you

Best Regards

Padma Priya

AI Developer

PhenoMx, Inc.

priya@phenomx.ai | (+82)10-5405-2685