Hello, Nick

the output of uname -a is

"Linux Jie-Liu-Linux 2.6.35-25-generic #44-Ubuntu SMP Fri Jan 21 17:40:48 UTC 2011 i686 GNU/Linux"

thanks

Jie




> Subject: Re: [Freesurfer] installation problem
> From: nicks@nmr.mgh.harvard.edu
> To: rememberer@hotmail.com
> CC: freesurfer@nmr.mgh.harvard.edu
> Date: Wed, 23 Feb 2011 11:59:16 -0500
>
> what is the output of
>
> uname -a
>
>
> On Thu, 2011-02-24 at 00:53 +0800, Liukarl wrote:
> > Hello, Freesurfer experts:
> >
> >
> >
> > I emailed some installation problems a couple days ago, but haven¡¯t
> > answered yet. I am new to freesurfer and try to install the newest
> > version of freesurfer in Ubuntu system. I closely followed the
> > instructions, and the only difference is that I installed it in my
> > Documents, instead of local folder.
> >
> >
> >
> >
> >
> > Below is the output after ¡°source $FREESURFER_HOME/SetUpFreeSurfer.sh¡±
> >
> >
> >
> >
> >
> > -------- freesurfer-Linux-centos4-stable-pub-v5.0.0 --------
> >
> >
> >
> > Setting up environment for FreeSurfer/FS-FAST (and FSL)
> >
> >
> >
> > FREESURFER_HOME /home/jie/Documents/freesurfer/
> >
> >
> >
> > FSFAST_HOME /home/jie/Documents/freesurfer//fsfast
> >
> >
> >
> > FSF_OUTPUT_FORMAT nii
> >
> >
> >
> > SUBJECTS_DIR /home/jie/Documents/freesurfer//subjects
> >
> >
> >
> > MNI_DIR /home/jie/Documents/freesurfer//mni
> >
> >
> >
> > Everything seems fine and I also added the .license file to the< br>> > freesurfer folder. But when I test it by ¡°tkmedit bert orig.mgz¡±, it
> > reponds ¡°Illegal instruction¡±
> >
> >
> >
> > If I type in ¡°recon-all¡±, it will show
> >
> >
> >
> > ¡° Required Arguments:
> >
> >
> >
> > -subjid <subjid>
> >
> >
> >
> > -<process directive>¡­... ¡± and the other arguments.
> >
> >
> >
> >
> >
> > How to fix the problem and make Fressurfer run? Any help is
> > appreciated. Thanks a lot!
> >
> >
> >
> >
> >
> > PS: my Ubuntu is 32-bit and choose the 32-bit version Freesurfer.
> >
> >
> >
> > Jie
> >
> > _______________________________________________
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
>
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