The log file you send says that the subject was finished without error. Can you send a log file that has your error in it?

On 4/29/2020 4:56 AM, jiahui wrote:

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Hello FreeSurfer Developers,

I'm attempting to compute  gray matter volume, but for some of my subjects I get the following error when I run the recon-all -all command:
 ERROR: inflating to sphere (rms error < 2.00)  final distance error

I've searched the list and no similar errors have been reported. Does anyone have any thoughts on how to trouble-shoot this one? Also, Ive attached the recon-all.log in case it's of any use. 
1) FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c
2) Platform: ubuntu 16.04.6 LTS 
3) recon-all.log: see attached


 


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