Looks like you have an incorrect space after the word recon

On Sep 28, 2018, at 1:35 PM, Miguel Ángel Rivas Fernández <miguelrivasfdez@gmail.com> wrote:

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Hi Freesurfer devs,

I tried to re run the recon -all after put some control points in the brainmask and I get the following error:

pcpb3846:~ lab1-rmn$ recon -all -autorecon2-cp -autorecon3 -4025 cp_before

-bash: recon: command not found

What could be the problem? The Freesurfer version that I am using at this moment is freesurfer-Darwin-OSX-stable-pub-v6.0.0-2beb96c

Thanks in advance,

Best,

Miguel Ángel Rivas Fernández