External Email - Use Caution        

Dear FreeSurfer Developers, 

I have the most recent version of FreeSurfer installed on a MacOS Mojave (10.14) and as I was running recon-all, I received the following error message: 

"Assertion failed at line 742 in file templates/CachedArray.cc
nu_estimate_np_and_em: crashed while running volume_stats (termination status=256)
nu_correct: crashed while running nu_estimate_np_and_em (termination status=256)
ERROR: nu_correct
Darwin Martas-MacBook-Pro.local 18.0.0 Darwin Kernel Version 18.0.0: Wed Aug 22 20:13:40 PDT 2018; root:xnu-4903.201.2~1/RELEASE_X86_64 x86_64

recon-all -s plc0061 exited with ERRORS at Tue Nov 20 22:32:15 EST 2018"

I reviewed many threads on the same error message, but none of them were solved. I have the same version of FreeSurfer on two other MacBooks (with older versions of iOS) and both work fine. I ran fixup_mni_paths as it was suggested on multiple threads and nu_correct, as well and I got the following message: 

"nu_correct
nu_correct, version 1.12.0
Usage: nu_correct [-help] [options] in.mnc out.mnc"

Any thoughts on what the problem might be and how it could be fixed? Could this be an iOS compatibility issue? 

Gratefully, 
Marta
--
Marta Korom  |  PhD Candidate
University of Delaware, Clinical Science
phone: 646 861 8461