On Oct 24, 2011, at 10:30 AM, Bruce Fischl wrote:
> not yet, although it is something we are working on.
>
> cheers
> Bruce
> On Mon, 24 Oct 2011, Cartik Sharma wrote:
>
>> Hi Knut,
>> Good to know we can speed things up with CUDA. I have a multicore CPU and was wondering if
>> there is a parallelized version of Freesurfer on the CPU.
>> Thanks for the speedup!
>> Best regards,
>> Cartik
>> On Oct 24, 2011, at 4:41 AM, Knut J Bjuland wrote:
>>
>> Hi Cartik
>>
>> You use -use-gpu to offload rendering to the GPU using cuda.
>>
>> Knut J
>>
>> > From:
Cartik.Sharma@childmind.org
>> > To:
knutjbj@hotmail.com
>> > Subject: Re: [Freesurfer] implementation on Neurodebian
>> > Date: Thu, 20 Oct 2011 15:48:10 +0000
>> >
>> > Hi Knut:
>> >
>> > Cool..is this speeding up things by rendering on the GPU.
>> > Is there a way to offload computation to the GPU.
>> >
>> > Best regards,
>> > Cartik
>> >
>> > On Oct 20, 2011, at 10:57 AM, Knut J Bjuland wrote:
>> >
>> > > Hi Cartik
>> > >
>> > > If you enable cuda with -use-gpu the recon-all will run faster.
>> > >
>> > > Knut J
>> > >
>> > > Den 17.10.2011 16:41, skrev Cartik Sharma:
>> > >> Dear Freesurfer developer(s),
>> > >>
>> > >> Is there a way to get Freesurfer run faster on Neurodebian. While the package produces
>> > >> some truly out of the world segmentations and labels for the cortical surface, it seems
>> > >> to take time.
>> > >>
>> > >> For eg:
>> > >> Defect correction and retesellation takes an hour, other steps take longer..I'm not sure if
>> > >> it's the original dataset, the OS platform (i.e Virtual Machine, Neurodebian) or original
>> > >> computational engine itself.
>> > >>
>> > >> Would be happy in efforts and hints to make this run faster.
>> > >>
>> > >> Best regards,
>> > >> Cartik Sharma
>> > >>
>> > >>
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>> > >>
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>> > >>
>> > >>
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