Nothing wrong per se, it is just that the inflation was done assuming a certain number of vertices. You can try changing the number of iterations in the inflation with,eg,
cd $SUBJECTS/fsaverage/surf
mris_inflate -dist .01 -f .001 -no-save-sulc 5 lh.smoothwm lh.inflated
In this case I set it to 5, but you can play with it.

If you don't need the inflated for this, then you can just ignore

On 1/15/2020 6:24 AM, Marina Fernández wrote:

External Email - Use Caution

Is there something wrong?

> Dear Freesurfer team,
>
> I created the FS average subject of the same dataset with 5th and 6th order icosahedron tesselation using the following commands:
> make_average_subject --fsgd fsgd.txt --ico 5 --out avg_subject_ico5
> make_average_subject --fsgd fsgd.txt --ico 6 --out avg_subject_ico6

>
> When I load the inflated surface of the avg_subject_ico5 with tksurfer , it has a oval shape while > when I load the avg_subject_ico6 it seems to be a normal shape.
> Please, see attached image.

>

> Thank you in advance.
>
> Best wishes,
> Marina.
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