Hi FreeSurfer Experts,
I am trying surface-based analysis of task-fMRI with FS-FAST. However, I would like to apply ICA-based denoising and wavelet-despiking which can be not done with the 'preproc-sess'. I wonder if I can do the preprocessing with other tools before registration with FS anatomical and normalization? If it is available, how can I do it with command line?
Another question is if can I use other template for parcellation during using 'recon-all', such as the template of Human Connectome Project?
Looking forward to your kind reply.