Ran mris_fwhm and got the attached.

On Thursday, January 24, 2019, Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu> wrote:

Based on the output below, it looks like there are problems with running
one of the freesurfer binaries. Can you run mris_fwhm ? Just type the
command and return and see what happens.



/home/apps/freesurfer-6.0/freesurfer/bin/mris_fwhm --mask
/share/VA_Imaging/Projects/salat/2389_TRT/abedi/TRT_0008_recon/Bold1/fc.lpccseed.surf.lh/mask.nii.gz
--i
/share/VA_Imaging/Projects/salat/2389_TRT/abedi/TRT_0008_recon/Bold1/fc.lpccseed.surf.lh/rho1mn.nii.gz
--o
/share/VA_Imaging/Projects/salat/2389_TRT/abedi/TRT_0008_recon/Bold1/fc.lpccseed.surf.lh/rho1mn.sm.nii.gz
--fwhm 20.000000 --smooth-only --s fsaverage --hemi lh --sd
/share/VA_Imaging/Projects/salat/2389_TRT/abedi
/home/apps/freesurfer-6.0/freesurfer/bin/mris_fwhm:
/home/apps/matlab/MATLAB/R2011b/sys/os/glnxa64/libstdc++.so.6: version
`GLIBCXX_3.4.11' not found (required by
/home/apps/freesurfer-6.0/freesurfer/bin/mris_fwhm)



On 1/23/19 10:11 AM, Amrita Bedi wrote:
>
>         External Email - Use Caution
>
> Hi Dr Greve,
>
> Attached is the log file.
>
> On Tuesday, January 22, 2019, Greve, Douglas N.,Ph.D.
> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> wrote:
>
>     Can you send the full terminal output and/or the log file?
>
>     On 1/22/19 2:53 PM, Amrita Bedi wrote:
>     >
>     >         External Email - Use Caution
>     >
>     > Hello Freesurfer developers,
>     >
>     > I was following the functional connectivity walkthrough for resting
>     > stage BOLD data and I got the attached error when I ran step 8
>     > (selxavg3-sess). Does anyone have any thoughts on how to trouble
>     shoot
>     > this?
>     > Not sure if it’s of any use but I ran this using Freesurfer 6.0 on
>     > Centos 7.4
>     >
>     > Thank You.
>     >
>     > Best
>     > Amrita
>     >
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