Hi Freesurfers, 

I am trying to coregister with a high-res CT, but for some reason am getting a very sheered image when I am in tkregister. Should I use another CT?
Thank you!


1) MG93
2)tkregister2 --s MG93_SurferOutput --mov ct.mgz --reg spm.reg.dat --surf orig
3) no error message, just a sheered image


FREESURFER_HOME: /usr/local/freesurfer/stable5_3_0

'build-stamp.txt file does not exist!
This appears to be a very old version of FreeSurfer!

RedHat release: CentOS release 6.7 (Final)

Kernel info: Linux 2.6.32-573.3.1.el6.x86_64 x86_64

NMR Center info (/space/freesurfer exists):

  machine: huygens

  SUBJECTS_DIR: /autofs/space/huygens_001/users/mia/subjects

  PWD: /autofs/space/huygens_001/users/mia/subjects/MG93_SurferOutput/mri

  ssh huygens
  setenv SUBJECTS_DIR /autofs/space/huygens_001/users/mia/subjects
  cd /autofs/space/huygens_001/users/mia/subjects/MG93_SurferOutput/mri