Hi!
I am trying to run recon-all in version 5.3 with the -use-gpu flag. I am getting a strange error that I would love to get your input on:
cannot find freesurfer/average/RB_all_2008-03-26.gca
Neither the file nor the path exist.
This is the entire input and output:
recon-all -s hum_14600_parallel -i /neuro_tools/freesurfer/subjects/hum_14600/mri/011/mp2rage.nii -all -use-gpu
Testing for CUDA device:
nvcc: NVIDIA (R) Cuda compiler driver
Copyright (c) 2005-2012 NVIDIA Corporation
Built on Fri_Sep_21_17:28:58_PDT_2012
Cuda compilation tools, release 5.0, V0.2.1221
Driver : 10.0
Runtime : 5.0
Acquiring CUDA device
Using default device
CUDA device: Tesla K40m
======= NUMBER OF OPENMP THREADS = 1 =======
stable5
NVIDIA driver version info:
NVRM version: NVIDIA UNIX x86_64 Kernel Module 410.79 Thu Nov 15 10:41:04 CST 2018
ERROR: cannot find /neuro_tools/freesurfer/average/RB_all_2008-03-26.gca
Is there some documentation on how to set up the environment beyond
LD_LIBRARY_PATH? Could that be the issue? Everything works fine without the -use-gpu flag.
Thank you! Caspar