External Email - Use Caution
Here you go.
On Friday, January 25, 2019, Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu> wrote:Hi Amrita, can you just paste the text into the email?
thanks
doug
On 1/25/19 10:51 AM, Amrita Bedi wrote:
External Email - Use Caution
Hi Dr Greve,
Ran mris_fwhm and got the attached.
On Thursday, January 24, 2019, Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu> wrote:
Based on the output below, it looks like there are problems with running
one of the freesurfer binaries. Can you run mris_fwhm ? Just type the
command and return and see what happens.
/home/apps/freesurfer-6.0/freesurfer/bin/mris_fwhm --mask
/share/VA_Imaging/Projects/salat/2389_TRT/abedi/TRT_0008_rec on/Bold1/fc.lpccseed.surf.lh/m ask.nii.gz
--i
/share/VA_Imaging/Projects/salat/2389_TRT/abedi/TRT_0008_rec on/Bold1/fc.lpccseed.surf.lh/r ho1mn.nii.gz
--o
/share/VA_Imaging/Projects/salat/2389_TRT/abedi/TRT_0008_rec on/Bold1/fc.lpccseed.surf.lh/r ho1mn.sm.nii.gz
--fwhm 20.000000 --smooth-only --s fsaverage --hemi lh --sd
/share/VA_Imaging/Projects/salat/2389_TRT/abedi
/home/apps/freesurfer-6.0/freesurfer/bin/mris_fwhm:
/home/apps/matlab/MATLAB/R2011b/sys/os/glnxa64/libstdc++.so. 6: version
`GLIBCXX_3.4.11' not found (required by
/home/apps/freesurfer-6.0/freesurfer/bin/mris_fwhm)
On 1/23/19 10:11 AM, Amrita Bedi wrote:
>
> External Email - Use Caution
>
> Hi Dr Greve,
>
> Attached is the log file.
>
> On Tuesday, January 22, 2019, Greve, Douglas N.,Ph.D.
> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> wrote:
>
> Can you send the full terminal output and/or the log file?
>
> On 1/22/19 2:53 PM, Amrita Bedi wrote:
> >
> > External Email - Use Caution
> >
> > Hello Freesurfer developers,
> >
> > I was following the functional connectivity walkthrough for resting
> > stage BOLD data and I got the attached error when I ran step 8
> > (selxavg3-sess). Does anyone have any thoughts on how to trouble
> shoot
> > this?
> > Not sure if it’s of any use but I ran this using Freesurfer 6.0 on
> > Centos 7.4
> >
> > Thank You.
> >
> > Best
> > Amrita
> >
> > _______________________________________________
> > Freesurfer mailing list
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>
>
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