Segmentation into white matter gray matter and CSF of a rat brain
Can you give me brief directions-where to start from?

Thanks!

Shani


On Wed, May 8, 2013 at 3:46 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
Hi Shani

what kind of segmentation? In general yes, but you'll need to mess with the recon-all script

cheers
Bruce

On Wed, 8 May 2013, Shani Ben Amitay wrote:

Hello Freesurfer
I would like to extract the stream for surface-based analysis on the output of an in-house segmentation
process.Is this possible?How?

Thanks

Shani




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