No the workflow doesn't tell me to, I just was looking thru all the surfaces to see how they look. Yes the topology correction was run. So here's a snapshot of what the sphere looks like, and you can see something on the sphere surface, so I just thought it was a defect.
thanks! mark
On 11/6/05, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
Hi Mark,
there won't be any defects on the sphere once you've run the topology
correction, and in general you never need to look at the spheres (does the
workflow tell you to??). If the white and pial surfaces look good you
should be all set (although you should look at the auto parcellation to
make sure that the registration worked). To go to corresponding
points click on save point and goto point in tksurfer/tkmedit.