yes.

The images have lower SNR but we ran other subjects with similar acquisition parameters and we didn't have problems.


From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu>
Sent: Thursday, December 6, 2018 3:46:27 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Longitudinal Stream - LONG step
 
Does the orig.mgz file look ok?

On 11/30/2018 01:14 PM, Figueiro Longo, Maria Gabriela wrote:
>
>
> Hello FreeSurfer Developers,
>
> I'm attempting to run the longitudinal stream, but in the [LONG] step
> of one time-point of on of my subjects, I have the following error:
>
> MRInormInit():
> INFO: Modifying talairach volume c_(r,a,s) based on average_305
> MRInormalize():
> MRIsplineNormalize(): npeaks = 11
> Starting OpenSpline(): npoints = 11
> MRInormFindControlPoints: could not find enough control points
> building Voronoi diagram...
> performing soap bubble smoothing, sigma = 8...
>
> Iterating 2 times
> ---------------------------------
> 3d normalization pass 1 of 2
> No such file or directory
> MRInormFindControlPoints failed
> No such file or directory
>
> The segmentation of the this time-point for this subject ([CROSS]
> step) looks good and I couldn't find any error.
> I didn't find any similar error in the email list. Does anyone have
> any thoughts on how to trouble-shoot this one? I attached the
> recon-all.log.
>
> FS version: freesurfer-linux-centos7_x86_64-dev-20181130-24625d8
>
> Thanks, Gabriela
>
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


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