hi,

I have downloaded freesurfer in WINDOWSXP and want to run it via Cygwin. But it don't work. Is there possibility to run it ?

The freesurfer I used is the public copy. I follow the "LinuxInstall" and type :

tar xzvf freesurfer-Linux-rh9-stable-pub-v3.0.5-full.tar.gz

export FREESURFER_HOME=<j:/cygwin/usr/local/>/freesurfer
export SUBJECTS_DIR=<=<j:/>/freesurfer
. ${FREESURFER_HOME}/SetUpFreeSurfer.sh

and then, any command seems don't work, (e.g. mri_convert , tkmedit, tksurfer) and reture erro like this (bash: mri_convert: command not found).

how to resolve the problem and how to run it normally in WINDOWSXP?

thank you!

Shen Lin

--
Lin Shen, MMS, Department of Neurology,
The First Affiliated Hospital, ChongQing Medical University
No.1, Yixueyuan Road, ChongQing, 400016 China
Phone: +86 23 13193076520
E-mail: shenlin918@gmail.com