Dear all,

I ran recon-all with my dataset and I am pretty satisfied with the cortical reconstruction of both hemispheres.

Unfortnuately, there was no Cerebellar reconstrucion.

Is there any way to also get a surface reconstruction of the cerebellum with recon-all or is there even a seperate command for that?

I tried to do it with

mri_tessellate /mri/aseg.mgz 8 /lh_cerebellum.gii

mri_tessellate /mri/aseg.mgz 47 /rh_cerebellum.gii

and also with

mri_vol2surf --mov /mri/aseg.mgz --hemi lh --surf cerebellum --mni152reg --o /lh_cerebellum.gii

but both times the created .gii file seems to be empty.

I read myself through many Archive threads and the freesurfer wiki, but since I am not using freesurfer regularly, I do not know what else I could do.

And if a surface reconstruction is possible for the cerebellum, is it also possible for the brain stem?

Thanks alot in advance!

Best regards,

Max Crayen