Hi Samar - Can you please attach your trac-all.log file and your configuration file? It's hard to guess what's going on just from the line where the error occurs without seeing everything that came before it.

Thanks!

Anastasia.

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From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Samar Fouda <samarsfouda@gmail.com>
Sent: Friday, October 16, 2020 10:00 AM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Help!

 

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Hi! I am trying to run tracula- TRAC-All and I get this error message, i assumed it is because that bvals and bvecs needed to be predetermined but it seems like that is not the case and i am still getting the same error:

Transform file should be eddy_correct/eddy log file or .mat file

What do you think the problem is?

Thanks so much for your help. 

--

--

Samar Fouda

Post Doctoral Associate

Emerge Research Program

National Center for PTSD, Clinical Neuroscience Division

Yale School of Medicine

Samar.fouda@yale.edu

+1203285-7568

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