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hello, FSI do the brain region parcellation, I have label(ground truth) for each subject. I want to use my own neural network segmentation results and Freesurfer automatic segmentation results comparison, to get a qualitative and quantitative results? Which file in the label folder is the result of automatic segmentation? And how do I get quantitative results?
As seen in some articles, the result of automatic segmentation by Freesurfer is 84.39 for DICE and 85.19 for ACC.