Dear Freesurfers,

I run the preprocessing step of some functional data with preproc-sess, then the Fourier analysis with matlab. Now, I'm trying to plot this data on the surface:

mri_vol2surf --mov Katkov_OT_45.nii.gz --trgsubject MishaK --hemi lh --reg register.dof6.dat --o Katkov_OT_45_LH.nii.gz

I used as registration matrix the one produced by the preprocessing step but when I try to visualize the map on the surface it looks like completely misaligned.

Thank you
Best
Francesca



--
Francesca Strappini, Ph.D.
Neurobiology Department
Weizmann Institute of Science
234 Herzl Street, Rehovot 7610001 Israel
Tel.: +972 58 444 2584
E-mail: francesca.strappini@weizmann.ac.il