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Hi freesurfer-experts,

I used a customized script that produces a more fine-grained parcellation resulting in an .annot file.

I don’t seem to have a look-up-table (LUT), however.

I tried the following:

- mri_annotation2label à allows me to extract the single labels. But I rather need a .ctab file when I want to read out my values.

- mris_anatomical_stats with the –c flag à to output the colortable as a text file I first need the .ctab file.

Is there a way to get the LUT in a text file or the .ctab file just from the annotation file?

Thanks a lot in advance!

Cheers,

Stephanie

Stephanie Winkelbeiner, MSc

Research Coordinator

Psychiatry Research

Zucker Hillside Hospital

75-59 263 Street

Glen Oaks, NY 11004

Tel: (718) 470-4588

Email: swinkelbei@northwell.edu

Northwell Health

Visit us at Northwell.edu

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