Hi,
I have just downloaded and I thought installed
freesurfer on a Debian system (Debian 3.2.51-1 x86_64 GNU/Linux).
However when I go to test the install by typing in freeview (or any other command) in the
terminal window I get the following:
% freeview
freeview: Command not found.
Before doing this, I added my license key to a .license file in the freesurfer directory.
I had also previously set up the environment as follows:
% setenv FREESURFER_HOME /Data/freesurfer
% source $FREESURFER_HOME/SetUpFreeSurfer.csh
-------- freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 --------
Setting up environment for FreeSurfer/FS-FAST (and FSL)
FREESURFER_HOME /Data/freesurfer
FSFAST_HOME /Data/freesurfer/fsfast
FSF_OUTPUT_FORMAT nii.gz
SUBJECTS_DIR /Data/freesurfer/subjects
MNI_DIR /Data/freesurfer/mni
When I type freesurfer in the terminal window I am told that:
You are running this version of FreeSurfer:
freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0
_____
Can
you help me figure out why I can't get freesurfer to run?? I have
previously been able to install and use freesurfer on a different
computer running Unbuntu.
Many Thanks,
Laura