if you expect cerebellar volume to vary in an uninteresting way with head size (which I think you probably do)

On Fri, 10 Jun 2016, Marja Caverlé wrote:

Ok Thanks! Just to be sure, the eTIV would also make the cerebellar numbers
more informative right?

Best,

Marja

On Fri, Jun 10, 2016 at 11:14 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu>
wrote:
      Hi Marja

      yes, you can just use those volumes, and no, including it as a
      regressor isn't the same as dividing by eTIV (although you can
      do that instead).

      cheers
      Bruce
      On Fri, 10 Jun 2016, Marja Caverlé wrote:

            Ok thanks Bruce.

            If I want to use these cerebellar white matter
            volumes, I assume I also need
            to use the eTIV as regressor right? (just like for
            the cerebral volumes?

            And maybe a stupid question, but can I use the eTIV
            as regressor by just
            dividing the structure volume by the eTIV?

            Best,

            Marja

            On Fri, Jun 10, 2016 at 10:56 PM, Bruce Fischl
            <fischl@nmr.mgh.harvard.edu>
            wrote:
                  Hi Marja

                  we do whole cerebellum white matter and gray
            matter, but things
                  like lobules aren't released yet.

                  cheers
                  Bruce
                  On Fri, 10 Jun 2016, Marja Caverlé wrote:

                        Hi all,

                        I am hoping to find some cerebellar
            volumes, but I
                        don't know how to get
                        them.
                        I already did recon -all on all my
            subjects, but I
                        cannot find any of these
                        numbers in the .stats files. Am I just
            missing them,
                        or does the recon all
                        not do any cerebellar stuff?

                        Best,

                        Marja


            _______________________________________________
            Freesurfer mailing list
            Freesurfer@nmr.mgh.harvard.edu
            https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


            The information in this e-mail is intended only for
            the person to whom
            it is
            addressed. If you believe this e-mail was sent to
            you in error and the
            e-mail
            contains patient information, please contact the
            Partners Compliance
            HelpLine at
            http://www.partners.org/complianceline . If the
            e-mail was sent to you
            in error
            but does not contain patient information, please
            contact the sender
            and properly
            dispose of the e-mail.




_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom
it is
addressed. If you believe this e-mail was sent to you in error and the
e-mail
contains patient information, please contact the Partners Compliance
HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you
in error
but does not contain patient information, please contact the sender
and properly
dispose of the e-mail.

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.