setenv SUBJECTS_DIR /REMOVED_DIR /usr/local/freesurfer/bin/make_average_surface --out avg_elder --subjects 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 $Id: make_average_surface,v 1.62 2016/02/16 17:17:20 zkaufman Exp $ Wed Jul 3 14:06:45 CEST 2019 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder output ddir is /REMOVED_DIR uid=10073(mje) gid=100(users) groups=100(users),200(stormuser),10001(users),10058(mindlab_057),10062(mindlab_061),10150(mindlab_149),10151(mindlab_150),10212(mindlab_211),10219(mindlab_218),10220(mindlab_219),10253(mindlab_252),10327(mindlab_315),10379(mindlab_367),10411(mindlab_399),10414(irb),10420(mindlab_405),10422(mindlab_407),10426(mindlab_411) ==================== make_average_surface ==================== Wed Jul 3 14:06:45 CEST 2019 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/make_average_surface --out avg_elder --subjects 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 input subjects: 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 output subject: avg_elder mri_add_xform_to_header -c auto /REMOVED_DIR/avg_elder/mri/mni305.cor.mgz /REMOVED_DIR/avg_elder/mri/mni305.cor.mgz INFO: extension is mgz #@# Making lh registration template --------- /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mris_make_template -norot -annot aparc lh sphere.reg 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 lh.reg.template.tif not aligning hemispheres before averaging. zeroing medial wall in aparc creating new parameterization... processing subject 0001 (1 of 25) reading spherical surface /REMOVED_DIR/0001/surf/lh.sphere.reg... reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0001/surf/lh.inflated.H... curvature mean = -0.038, std = 0.979 computing parameterization for surface /REMOVED_DIR/0001/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0001/surf/lh.smoothwm... processing subject 0002 (2 of 25) reading spherical surface /REMOVED_DIR/0002/surf/lh.sphere.reg... curvature mean = -0.025, std = 5.566 curvature mean = -0.021, std = 0.269 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0002/surf/lh.inflated.H... curvature mean = -0.045, std = 0.954 computing parameterization for surface /REMOVED_DIR/0002/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0002/surf/lh.smoothwm... processing subject 0003 (3 of 25) reading spherical surface /REMOVED_DIR/0003/surf/lh.sphere.reg... curvature mean = -0.051, std = 5.613 curvature mean = -0.018, std = 0.259 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0003/surf/lh.inflated.H... curvature mean = -0.037, std = 0.951 computing parameterization for surface /REMOVED_DIR/0003/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0003/surf/lh.smoothwm... processing subject 0004 (4 of 25) reading spherical surface /REMOVED_DIR/0004/surf/lh.sphere.reg... curvature mean = -0.025, std = 5.597 curvature mean = -0.020, std = 0.262 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0004/surf/lh.inflated.H... curvature mean = -0.047, std = 0.875 computing parameterization for surface /REMOVED_DIR/0004/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0004/surf/lh.smoothwm... processing subject 0005 (5 of 25) reading spherical surface /REMOVED_DIR/0005/surf/lh.sphere.reg... curvature mean = -0.030, std = 5.621 curvature mean = -0.021, std = 0.243 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0005/surf/lh.inflated.H... curvature mean = -0.032, std = 0.962 computing parameterization for surface /REMOVED_DIR/0005/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0005/surf/lh.smoothwm... processing subject 0006 (6 of 25) reading spherical surface /REMOVED_DIR/0006/surf/lh.sphere.reg... curvature mean = -0.035, std = 5.584 curvature mean = -0.021, std = 0.275 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0006/surf/lh.inflated.H... curvature mean = -0.031, std = 0.980 computing parameterization for surface /REMOVED_DIR/0006/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0006/surf/lh.smoothwm... processing subject 0023 (7 of 25) reading spherical surface /REMOVED_DIR/0023/surf/lh.sphere.reg... curvature mean = -0.003, std = 5.740 curvature mean = -0.023, std = 0.262 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0023/surf/lh.inflated.H... curvature mean = -0.036, std = 0.993 computing parameterization for surface /REMOVED_DIR/0023/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0023/surf/lh.smoothwm... processing subject 0008 (8 of 25) reading spherical surface /REMOVED_DIR/0008/surf/lh.sphere.reg... curvature mean = -0.017, std = 5.453 curvature mean = -0.024, std = 0.276 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0008/surf/lh.inflated.H... curvature mean = -0.044, std = 0.977 computing parameterization for surface /REMOVED_DIR/0008/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0008/surf/lh.smoothwm... processing subject 0009 (9 of 25) reading spherical surface /REMOVED_DIR/0009/surf/lh.sphere.reg... curvature mean = -0.020, std = 5.342 curvature mean = -0.019, std = 0.276 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0009/surf/lh.inflated.H... curvature mean = -0.047, std = 0.956 computing parameterization for surface /REMOVED_DIR/0009/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0009/surf/lh.smoothwm... processing subject 0010 (10 of 25) reading spherical surface /REMOVED_DIR/0010/surf/lh.sphere.reg... curvature mean = -0.047, std = 5.465 curvature mean = -0.020, std = 0.256 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0010/surf/lh.inflated.H... curvature mean = -0.042, std = 0.942 computing parameterization for surface /REMOVED_DIR/0010/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0010/surf/lh.smoothwm... processing subject 0011 (11 of 25) reading spherical surface /REMOVED_DIR/0011/surf/lh.sphere.reg... curvature mean = -0.042, std = 5.508 curvature mean = -0.020, std = 0.256 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0011/surf/lh.inflated.H... curvature mean = -0.048, std = 0.926 computing parameterization for surface /REMOVED_DIR/0011/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0011/surf/lh.smoothwm... processing subject 0012 (12 of 25) reading spherical surface /REMOVED_DIR/0012/surf/lh.sphere.reg... curvature mean = -0.034, std = 5.560 curvature mean = -0.022, std = 0.258 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0012/surf/lh.inflated.H... curvature mean = -0.056, std = 0.935 computing parameterization for surface /REMOVED_DIR/0012/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0012/surf/lh.smoothwm... processing subject 0013 (13 of 25) reading spherical surface /REMOVED_DIR/0013/surf/lh.sphere.reg... curvature mean = -0.021, std = 5.373 curvature mean = -0.022, std = 0.274 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0013/surf/lh.inflated.H... curvature mean = -0.037, std = 0.938 computing parameterization for surface /REMOVED_DIR/0013/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0013/surf/lh.smoothwm... processing subject 0014 (14 of 25) reading spherical surface /REMOVED_DIR/0014/surf/lh.sphere.reg... curvature mean = -0.021, std = 5.602 curvature mean = -0.022, std = 0.248 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0014/surf/lh.inflated.H... curvature mean = -0.004, std = 0.916 computing parameterization for surface /REMOVED_DIR/0014/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0014/surf/lh.smoothwm... processing subject 0015 (15 of 25) reading spherical surface /REMOVED_DIR/0015/surf/lh.sphere.reg... curvature mean = 0.013, std = 5.545 curvature mean = -0.024, std = 0.292 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0015/surf/lh.inflated.H... curvature mean = -0.042, std = 0.944 computing parameterization for surface /REMOVED_DIR/0015/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0015/surf/lh.smoothwm... processing subject 0016 (16 of 25) reading spherical surface /REMOVED_DIR/0016/surf/lh.sphere.reg... curvature mean = -0.023, std = 5.486 curvature mean = -0.022, std = 0.280 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0016/surf/lh.inflated.H... curvature mean = -0.041, std = 0.945 computing parameterization for surface /REMOVED_DIR/0016/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0016/surf/lh.smoothwm... processing subject 0017 (17 of 25) reading spherical surface /REMOVED_DIR/0017/surf/lh.sphere.reg... curvature mean = -0.038, std = 5.571 curvature mean = -0.021, std = 0.265 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0017/surf/lh.inflated.H... curvature mean = -0.041, std = 0.981 computing parameterization for surface /REMOVED_DIR/0017/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0017/surf/lh.smoothwm... processing subject 0018 (18 of 25) reading spherical surface /REMOVED_DIR/0018/surf/lh.sphere.reg... curvature mean = -0.017, std = 5.584 curvature mean = -0.021, std = 0.256 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0018/surf/lh.inflated.H... curvature mean = -0.031, std = 1.000 computing parameterization for surface /REMOVED_DIR/0018/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0018/surf/lh.smoothwm... processing subject 0019 (19 of 25) reading spherical surface /REMOVED_DIR/0019/surf/lh.sphere.reg... curvature mean = -0.019, std = 5.596 curvature mean = -0.021, std = 0.272 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0019/surf/lh.inflated.H... curvature mean = -0.026, std = 0.945 computing parameterization for surface /REMOVED_DIR/0019/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0019/surf/lh.smoothwm... processing subject 0020 (20 of 25) reading spherical surface /REMOVED_DIR/0020/surf/lh.sphere.reg... curvature mean = -0.033, std = 5.803 curvature mean = -0.019, std = 0.301 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0020/surf/lh.inflated.H... curvature mean = -0.026, std = 0.954 computing parameterization for surface /REMOVED_DIR/0020/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0020/surf/lh.smoothwm... processing subject 0021 (21 of 25) reading spherical surface /REMOVED_DIR/0021/surf/lh.sphere.reg... curvature mean = -0.011, std = 5.440 curvature mean = -0.019, std = 0.297 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0021/surf/lh.inflated.H... curvature mean = -0.045, std = 0.954 computing parameterization for surface /REMOVED_DIR/0021/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0021/surf/lh.smoothwm... processing subject 0022 (22 of 25) reading spherical surface /REMOVED_DIR/0022/surf/lh.sphere.reg... curvature mean = -0.024, std = 5.561 curvature mean = -0.017, std = 0.247 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0022/surf/lh.inflated.H... curvature mean = -0.029, std = 0.992 computing parameterization for surface /REMOVED_DIR/0022/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0022/surf/lh.smoothwm... processing subject 0023 (23 of 25) reading spherical surface /REMOVED_DIR/0023/surf/lh.sphere.reg... curvature mean = -0.018, std = 5.582 curvature mean = -0.022, std = 0.263 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0023/surf/lh.inflated.H... curvature mean = -0.036, std = 0.993 computing parameterization for surface /REMOVED_DIR/0023/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0023/surf/lh.smoothwm... processing subject 0024 (24 of 25) reading spherical surface /REMOVED_DIR/0024/surf/lh.sphere.reg... curvature mean = -0.017, std = 5.453 curvature mean = -0.024, std = 0.276 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0024/surf/lh.inflated.H... curvature mean = -0.035, std = 1.004 computing parameterization for surface /REMOVED_DIR/0024/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0024/surf/lh.smoothwm... processing subject 0025 (25 of 25) reading spherical surface /REMOVED_DIR/0025/surf/lh.sphere.reg... curvature mean = -0.005, std = 5.651 curvature mean = -0.021, std = 0.250 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0025/surf/lh.inflated.H... curvature mean = -0.037, std = 0.986 computing parameterization for surface /REMOVED_DIR/0025/surf/lh.sulc... computing parameterization for surface /REMOVED_DIR/0025/surf/lh.smoothwm... writing updated template with 25 subjects to lh.reg.template.tif... curvature mean = -0.022, std = 5.642 curvature mean = -0.026, std = 0.276 #@# Making rh registration template --------- /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mris_make_template -norot -annot aparc rh sphere.reg 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 rh.reg.template.tif not aligning hemispheres before averaging. zeroing medial wall in aparc creating new parameterization... processing subject 0001 (1 of 25) reading spherical surface /REMOVED_DIR/0001/surf/rh.sphere.reg... reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0001/surf/rh.inflated.H... curvature mean = -0.042, std = 0.962 computing parameterization for surface /REMOVED_DIR/0001/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0001/surf/rh.smoothwm... processing subject 0002 (2 of 25) reading spherical surface /REMOVED_DIR/0002/surf/rh.sphere.reg... curvature mean = -0.030, std = 5.603 curvature mean = -0.023, std = 0.285 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0002/surf/rh.inflated.H... curvature mean = -0.048, std = 0.931 computing parameterization for surface /REMOVED_DIR/0002/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0002/surf/rh.smoothwm... processing subject 0003 (3 of 25) reading spherical surface /REMOVED_DIR/0003/surf/rh.sphere.reg... curvature mean = -0.049, std = 5.555 curvature mean = -0.017, std = 0.268 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0003/surf/rh.inflated.H... curvature mean = -0.032, std = 0.995 computing parameterization for surface /REMOVED_DIR/0003/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0003/surf/rh.smoothwm... processing subject 0004 (4 of 25) reading spherical surface /REMOVED_DIR/0004/surf/rh.sphere.reg... curvature mean = -0.027, std = 5.591 curvature mean = -0.019, std = 0.261 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0004/surf/rh.inflated.H... curvature mean = -0.032, std = 0.868 computing parameterization for surface /REMOVED_DIR/0004/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0004/surf/rh.smoothwm... processing subject 0005 (5 of 25) reading spherical surface /REMOVED_DIR/0005/surf/rh.sphere.reg... curvature mean = -0.065, std = 5.699 curvature mean = -0.021, std = 0.256 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0005/surf/rh.inflated.H... curvature mean = -0.035, std = 0.943 computing parameterization for surface /REMOVED_DIR/0005/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0005/surf/rh.smoothwm... processing subject 0006 (6 of 25) reading spherical surface /REMOVED_DIR/0006/surf/rh.sphere.reg... curvature mean = -0.038, std = 5.627 curvature mean = -0.020, std = 0.269 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0006/surf/rh.inflated.H... curvature mean = -0.041, std = 0.976 computing parameterization for surface /REMOVED_DIR/0006/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0006/surf/rh.smoothwm... processing subject 0023 (7 of 25) reading spherical surface /REMOVED_DIR/0023/surf/rh.sphere.reg... curvature mean = -0.039, std = 5.684 curvature mean = -0.021, std = 0.262 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0023/surf/rh.inflated.H... curvature mean = -0.038, std = 0.991 computing parameterization for surface /REMOVED_DIR/0023/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0023/surf/rh.smoothwm... processing subject 0008 (8 of 25) reading spherical surface /REMOVED_DIR/0008/surf/rh.sphere.reg... curvature mean = -0.029, std = 5.474 curvature mean = -0.026, std = 0.273 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0008/surf/rh.inflated.H... curvature mean = -0.050, std = 0.932 computing parameterization for surface /REMOVED_DIR/0008/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0008/surf/rh.smoothwm... processing subject 0009 (9 of 25) reading spherical surface /REMOVED_DIR/0009/surf/rh.sphere.reg... curvature mean = -0.040, std = 5.331 curvature mean = -0.019, std = 0.265 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0009/surf/rh.inflated.H... curvature mean = -0.042, std = 0.965 computing parameterization for surface /REMOVED_DIR/0009/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0009/surf/rh.smoothwm... processing subject 0010 (10 of 25) reading spherical surface /REMOVED_DIR/0010/surf/rh.sphere.reg... curvature mean = -0.036, std = 5.541 curvature mean = -0.019, std = 0.249 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0010/surf/rh.inflated.H... curvature mean = -0.045, std = 0.915 computing parameterization for surface /REMOVED_DIR/0010/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0010/surf/rh.smoothwm... processing subject 0011 (11 of 25) reading spherical surface /REMOVED_DIR/0011/surf/rh.sphere.reg... curvature mean = -0.042, std = 5.623 curvature mean = -0.022, std = 0.264 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0011/surf/rh.inflated.H... curvature mean = -0.042, std = 0.949 computing parameterization for surface /REMOVED_DIR/0011/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0011/surf/rh.smoothwm... processing subject 0012 (12 of 25) reading spherical surface /REMOVED_DIR/0012/surf/rh.sphere.reg... curvature mean = -0.021, std = 5.603 curvature mean = -0.021, std = 0.253 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0012/surf/rh.inflated.H... curvature mean = -0.053, std = 0.952 computing parameterization for surface /REMOVED_DIR/0012/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0012/surf/rh.smoothwm... processing subject 0013 (13 of 25) reading spherical surface /REMOVED_DIR/0013/surf/rh.sphere.reg... curvature mean = -0.040, std = 5.537 curvature mean = -0.019, std = 0.272 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0013/surf/rh.inflated.H... curvature mean = -0.043, std = 0.945 computing parameterization for surface /REMOVED_DIR/0013/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0013/surf/rh.smoothwm... processing subject 0014 (14 of 25) reading spherical surface /REMOVED_DIR/0014/surf/rh.sphere.reg... curvature mean = -0.037, std = 5.647 curvature mean = -0.023, std = 0.252 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0014/surf/rh.inflated.H... curvature mean = -0.031, std = 0.976 computing parameterization for surface /REMOVED_DIR/0014/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0014/surf/rh.smoothwm... processing subject 0015 (15 of 25) reading spherical surface /REMOVED_DIR/0015/surf/rh.sphere.reg... curvature mean = -0.032, std = 5.651 curvature mean = -0.024, std = 0.291 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0015/surf/rh.inflated.H... curvature mean = -0.040, std = 0.964 computing parameterization for surface /REMOVED_DIR/0015/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0015/surf/rh.smoothwm... processing subject 0016 (16 of 25) reading spherical surface /REMOVED_DIR/0016/surf/rh.sphere.reg... curvature mean = -0.036, std = 5.540 curvature mean = -0.021, std = 0.279 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0016/surf/rh.inflated.H... curvature mean = -0.040, std = 0.972 computing parameterization for surface /REMOVED_DIR/0016/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0016/surf/rh.smoothwm... processing subject 0017 (17 of 25) reading spherical surface /REMOVED_DIR/0017/surf/rh.sphere.reg... curvature mean = -0.026, std = 5.501 curvature mean = -0.021, std = 0.261 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0017/surf/rh.inflated.H... curvature mean = -0.041, std = 0.982 computing parameterization for surface /REMOVED_DIR/0017/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0017/surf/rh.smoothwm... processing subject 0018 (18 of 25) reading spherical surface /REMOVED_DIR/0018/surf/rh.sphere.reg... curvature mean = -0.022, std = 5.678 curvature mean = -0.022, std = 0.259 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0018/surf/rh.inflated.H... curvature mean = -0.033, std = 1.002 computing parameterization for surface /REMOVED_DIR/0018/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0018/surf/rh.smoothwm... processing subject 0019 (19 of 25) reading spherical surface /REMOVED_DIR/0019/surf/rh.sphere.reg... curvature mean = -0.025, std = 5.625 curvature mean = -0.023, std = 0.271 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0019/surf/rh.inflated.H... curvature mean = -0.034, std = 0.965 computing parameterization for surface /REMOVED_DIR/0019/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0019/surf/rh.smoothwm... processing subject 0020 (20 of 25) reading spherical surface /REMOVED_DIR/0020/surf/rh.sphere.reg... curvature mean = -0.040, std = 5.835 curvature mean = -0.018, std = 0.261 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0020/surf/rh.inflated.H... curvature mean = -0.047, std = 0.941 computing parameterization for surface /REMOVED_DIR/0020/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0020/surf/rh.smoothwm... processing subject 0021 (21 of 25) reading spherical surface /REMOVED_DIR/0021/surf/rh.sphere.reg... curvature mean = -0.034, std = 5.505 curvature mean = -0.020, std = 0.262 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0021/surf/rh.inflated.H... curvature mean = -0.042, std = 0.972 computing parameterization for surface /REMOVED_DIR/0021/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0021/surf/rh.smoothwm... processing subject 0022 (22 of 25) reading spherical surface /REMOVED_DIR/0022/surf/rh.sphere.reg... curvature mean = -0.032, std = 5.610 curvature mean = -0.017, std = 0.254 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0022/surf/rh.inflated.H... curvature mean = -0.028, std = 0.971 computing parameterization for surface /REMOVED_DIR/0022/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0022/surf/rh.smoothwm... processing subject 0023 (23 of 25) reading spherical surface /REMOVED_DIR/0023/surf/rh.sphere.reg... curvature mean = -0.023, std = 5.558 curvature mean = -0.022, std = 0.269 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0023/surf/rh.inflated.H... curvature mean = -0.038, std = 0.991 computing parameterization for surface /REMOVED_DIR/0023/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0023/surf/rh.smoothwm... processing subject 0024 (24 of 25) reading spherical surface /REMOVED_DIR/0024/surf/rh.sphere.reg... curvature mean = -0.029, std = 5.474 curvature mean = -0.026, std = 0.273 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0024/surf/rh.inflated.H... curvature mean = -0.044, std = 0.984 computing parameterization for surface /REMOVED_DIR/0024/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0024/surf/rh.smoothwm... processing subject 0025 (25 of 25) reading spherical surface /REMOVED_DIR/0025/surf/rh.sphere.reg... curvature mean = -0.014, std = 5.652 curvature mean = -0.021, std = 0.256 reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) ripping medial wall... computing parameterization for surface /REMOVED_DIR/0025/surf/rh.inflated.H... curvature mean = -0.015, std = 0.872 computing parameterization for surface /REMOVED_DIR/0025/surf/rh.sulc... computing parameterization for surface /REMOVED_DIR/0025/surf/rh.smoothwm... writing updated template with 25 subjects to rh.reg.template.tif... curvature mean = -0.027, std = 5.697 curvature mean = -0.025, std = 0.273 #@# Making average lh.white surface --------------------- Wed Jul 3 14:11:11 CEST 2019 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mris_make_average_surface -i 7 -o white -sdir-out /REMOVED_DIR lh white sphere.reg avg_elder 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 reading vertex positions from white... --------------------------------------------------- hemi = lh avg_surf_name = white canon_surf_name = sphere.reg out_sname = avg_elder xform = talairach.xfm --------------------------------------------------- --------------------------------------------------- #@# processing subject 1/25 0001... Reading /REMOVED_DIR/0001/surf/lh.sphere.reg Read /REMOVED_DIR/0001/mri/T1.mgz Surface area: 872.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 2/25 0002... Reading /REMOVED_DIR/0002/surf/lh.sphere.reg Read /REMOVED_DIR/0002/mri/T1.mgz Surface area: 961.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 3/25 0003... Reading /REMOVED_DIR/0003/surf/lh.sphere.reg Read /REMOVED_DIR/0003/mri/T1.mgz Surface area: 911.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 4/25 0004... Reading /REMOVED_DIR/0004/surf/lh.sphere.reg Read /REMOVED_DIR/0004/mri/T1.mgz Surface area: 981.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 5/25 0005... Reading /REMOVED_DIR/0005/surf/lh.sphere.reg Read /REMOVED_DIR/0005/mri/T1.mgz Surface area: 939.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 6/25 0006... Reading /REMOVED_DIR/0006/surf/lh.sphere.reg Read /REMOVED_DIR/0006/mri/T1.mgz Surface area: 992.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 7/25 0023... Reading /REMOVED_DIR/0023/surf/lh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 870.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 8/25 0008... Reading /REMOVED_DIR/0008/surf/lh.sphere.reg Read /REMOVED_DIR/0008/mri/T1.mgz Surface area: 845.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 9/25 0009... Reading /REMOVED_DIR/0009/surf/lh.sphere.reg Read /REMOVED_DIR/0009/mri/T1.mgz Surface area: 959.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 10/25 0010... Reading /REMOVED_DIR/0010/surf/lh.sphere.reg Read /REMOVED_DIR/0010/mri/T1.mgz Surface area: 1075.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 11/25 0011... Reading /REMOVED_DIR/0011/surf/lh.sphere.reg Read /REMOVED_DIR/0011/mri/T1.mgz Surface area: 983.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 12/25 0012... Reading /REMOVED_DIR/0012/surf/lh.sphere.reg Read /REMOVED_DIR/0012/mri/T1.mgz Surface area: 900.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 13/25 0013... Reading /REMOVED_DIR/0013/surf/lh.sphere.reg Read /REMOVED_DIR/0013/mri/T1.mgz Surface area: 858.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 14/25 0014... Reading /REMOVED_DIR/0014/surf/lh.sphere.reg Read /REMOVED_DIR/0014/mri/T1.mgz Surface area: 969.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 15/25 0015... Reading /REMOVED_DIR/0015/surf/lh.sphere.reg Read /REMOVED_DIR/0015/mri/T1.mgz Surface area: 839.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 16/25 0016... Reading /REMOVED_DIR/0016/surf/lh.sphere.reg Read /REMOVED_DIR/0016/mri/T1.mgz Surface area: 902.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 17/25 0017... Reading /REMOVED_DIR/0017/surf/lh.sphere.reg Read /REMOVED_DIR/0017/mri/T1.mgz Surface area: 902.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 18/25 0018... Reading /REMOVED_DIR/0018/surf/lh.sphere.reg Read /REMOVED_DIR/0018/mri/T1.mgz Surface area: 909.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 19/25 0019... Reading /REMOVED_DIR/0019/surf/lh.sphere.reg Read /REMOVED_DIR/0019/mri/T1.mgz Surface area: 1026.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 20/25 0020... Reading /REMOVED_DIR/0020/surf/lh.sphere.reg Read /REMOVED_DIR/0020/mri/T1.mgz Surface area: 874.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 21/25 0021... Reading /REMOVED_DIR/0021/surf/lh.sphere.reg Read /REMOVED_DIR/0021/mri/T1.mgz Surface area: 1023.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 22/25 0022... Reading /REMOVED_DIR/0022/surf/lh.sphere.reg Read /REMOVED_DIR/0022/mri/T1.mgz Surface area: 1007.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 23/25 0023... Reading /REMOVED_DIR/0023/surf/lh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 870.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 24/25 0024... Reading /REMOVED_DIR/0024/surf/lh.sphere.reg Read /REMOVED_DIR/0024/mri/T1.mgz Surface area: 859.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 25/25 0025... Reading /REMOVED_DIR/0025/surf/lh.sphere.reg Read /REMOVED_DIR/0025/mri/T1.mgz Surface area: 881.1 cm^2 Applying linear transform Finished loading all data Avg surf area = 928.675 cm Reading icosahedron from /usr/local/freesurfer/lib/bem/ic7.tri... setting group surface area to be 928.7 cm^2 (scale=1.14) Adding volume geometry from /usr/local/freesurfer/average/mni305.cor.mgz writing average white surface to /REMOVED_DIR/avg_elder/surf/lh.white writing group avg surface area 929 cm^2 into surface file mris_make_average_surface done #@# Making average lh.pial surface --------------------- Wed Jul 3 14:12:50 CEST 2019 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mris_make_average_surface -i 7 -o pial -sdir-out /REMOVED_DIR lh pial sphere.reg avg_elder 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 reading vertex positions from pial... --------------------------------------------------- hemi = lh avg_surf_name = pial canon_surf_name = sphere.reg out_sname = avg_elder xform = talairach.xfm --------------------------------------------------- --------------------------------------------------- #@# processing subject 1/25 0001... Reading /REMOVED_DIR/0001/surf/lh.sphere.reg Read /REMOVED_DIR/0001/mri/T1.mgz Surface area: 1030.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 2/25 0002... Reading /REMOVED_DIR/0002/surf/lh.sphere.reg Read /REMOVED_DIR/0002/mri/T1.mgz Surface area: 1132.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 3/25 0003... Reading /REMOVED_DIR/0003/surf/lh.sphere.reg Read /REMOVED_DIR/0003/mri/T1.mgz Surface area: 1083.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 4/25 0004... Reading /REMOVED_DIR/0004/surf/lh.sphere.reg Read /REMOVED_DIR/0004/mri/T1.mgz Surface area: 1176.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 5/25 0005... Reading /REMOVED_DIR/0005/surf/lh.sphere.reg Read /REMOVED_DIR/0005/mri/T1.mgz Surface area: 1090.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 6/25 0006... Reading /REMOVED_DIR/0006/surf/lh.sphere.reg Read /REMOVED_DIR/0006/mri/T1.mgz Surface area: 1177.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 7/25 0023... Reading /REMOVED_DIR/0023/surf/lh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 1052.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 8/25 0008... Reading /REMOVED_DIR/0008/surf/lh.sphere.reg Read /REMOVED_DIR/0008/mri/T1.mgz Surface area: 1008.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 9/25 0009... Reading /REMOVED_DIR/0009/surf/lh.sphere.reg Read /REMOVED_DIR/0009/mri/T1.mgz Surface area: 1152.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 10/25 0010... Reading /REMOVED_DIR/0010/surf/lh.sphere.reg Read /REMOVED_DIR/0010/mri/T1.mgz Surface area: 1263.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 11/25 0011... Reading /REMOVED_DIR/0011/surf/lh.sphere.reg Read /REMOVED_DIR/0011/mri/T1.mgz Surface area: 1158.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 12/25 0012... Reading /REMOVED_DIR/0012/surf/lh.sphere.reg Read /REMOVED_DIR/0012/mri/T1.mgz Surface area: 1076.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 13/25 0013... Reading /REMOVED_DIR/0013/surf/lh.sphere.reg Read /REMOVED_DIR/0013/mri/T1.mgz Surface area: 1018.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 14/25 0014... Reading /REMOVED_DIR/0014/surf/lh.sphere.reg Read /REMOVED_DIR/0014/mri/T1.mgz Surface area: 1170.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 15/25 0015... Reading /REMOVED_DIR/0015/surf/lh.sphere.reg Read /REMOVED_DIR/0015/mri/T1.mgz Surface area: 996.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 16/25 0016... Reading /REMOVED_DIR/0016/surf/lh.sphere.reg Read /REMOVED_DIR/0016/mri/T1.mgz Surface area: 1057.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 17/25 0017... Reading /REMOVED_DIR/0017/surf/lh.sphere.reg Read /REMOVED_DIR/0017/mri/T1.mgz Surface area: 1063.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 18/25 0018... Reading /REMOVED_DIR/0018/surf/lh.sphere.reg Read /REMOVED_DIR/0018/mri/T1.mgz Surface area: 1080.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 19/25 0019... Reading /REMOVED_DIR/0019/surf/lh.sphere.reg Read /REMOVED_DIR/0019/mri/T1.mgz Surface area: 1226.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 20/25 0020... Reading /REMOVED_DIR/0020/surf/lh.sphere.reg Read /REMOVED_DIR/0020/mri/T1.mgz Surface area: 1037.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 21/25 0021... Reading /REMOVED_DIR/0021/surf/lh.sphere.reg Read /REMOVED_DIR/0021/mri/T1.mgz Surface area: 1198.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 22/25 0022... Reading /REMOVED_DIR/0022/surf/lh.sphere.reg Read /REMOVED_DIR/0022/mri/T1.mgz Surface area: 1185.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 23/25 0023... Reading /REMOVED_DIR/0023/surf/lh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 1052.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 24/25 0024... Reading /REMOVED_DIR/0024/surf/lh.sphere.reg Read /REMOVED_DIR/0024/mri/T1.mgz Surface area: 1020.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 25/25 0025... Reading /REMOVED_DIR/0025/surf/lh.sphere.reg Read /REMOVED_DIR/0025/mri/T1.mgz Surface area: 1060.3 cm^2 Applying linear transform Finished loading all data Avg surf area = 1102.93 cm Reading icosahedron from /usr/local/freesurfer/lib/bem/ic7.tri... setting group surface area to be 1102.9 cm^2 (scale=1.18) Adding volume geometry from /usr/local/freesurfer/average/mni305.cor.mgz writing average pial surface to /REMOVED_DIR/avg_elder/surf/lh.pial writing group avg surface area 1103 cm^2 into surface file mris_make_average_surface done #@# Making average lh.orig surface --------------------- Wed Jul 3 14:14:28 CEST 2019 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mris_make_average_surface -i 7 -o orig -sdir-out /REMOVED_DIR lh orig sphere.reg avg_elder 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 reading vertex positions from orig... --------------------------------------------------- hemi = lh avg_surf_name = orig canon_surf_name = sphere.reg out_sname = avg_elder xform = talairach.xfm --------------------------------------------------- --------------------------------------------------- #@# processing subject 1/25 0001... Reading /REMOVED_DIR/0001/surf/lh.sphere.reg Read /REMOVED_DIR/0001/mri/T1.mgz Surface area: 828.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 2/25 0002... Reading /REMOVED_DIR/0002/surf/lh.sphere.reg Read /REMOVED_DIR/0002/mri/T1.mgz Surface area: 901.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 3/25 0003... Reading /REMOVED_DIR/0003/surf/lh.sphere.reg Read /REMOVED_DIR/0003/mri/T1.mgz Surface area: 868.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 4/25 0004... Reading /REMOVED_DIR/0004/surf/lh.sphere.reg Read /REMOVED_DIR/0004/mri/T1.mgz Surface area: 940.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 5/25 0005... Reading /REMOVED_DIR/0005/surf/lh.sphere.reg Read /REMOVED_DIR/0005/mri/T1.mgz Surface area: 880.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 6/25 0006... Reading /REMOVED_DIR/0006/surf/lh.sphere.reg Read /REMOVED_DIR/0006/mri/T1.mgz Surface area: 933.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 7/25 0023... Reading /REMOVED_DIR/0023/surf/lh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 824.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 8/25 0008... Reading /REMOVED_DIR/0008/surf/lh.sphere.reg Read /REMOVED_DIR/0008/mri/T1.mgz Surface area: 782.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 9/25 0009... Reading /REMOVED_DIR/0009/surf/lh.sphere.reg Read /REMOVED_DIR/0009/mri/T1.mgz Surface area: 908.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 10/25 0010... Reading /REMOVED_DIR/0010/surf/lh.sphere.reg Read /REMOVED_DIR/0010/mri/T1.mgz Surface area: 1017.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 11/25 0011... Reading /REMOVED_DIR/0011/surf/lh.sphere.reg Read /REMOVED_DIR/0011/mri/T1.mgz Surface area: 938.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 12/25 0012... Reading /REMOVED_DIR/0012/surf/lh.sphere.reg Read /REMOVED_DIR/0012/mri/T1.mgz Surface area: 833.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 13/25 0013... Reading /REMOVED_DIR/0013/surf/lh.sphere.reg Read /REMOVED_DIR/0013/mri/T1.mgz Surface area: 818.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 14/25 0014... Reading /REMOVED_DIR/0014/surf/lh.sphere.reg Read /REMOVED_DIR/0014/mri/T1.mgz Surface area: 907.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 15/25 0015... Reading /REMOVED_DIR/0015/surf/lh.sphere.reg Read /REMOVED_DIR/0015/mri/T1.mgz Surface area: 780.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 16/25 0016... Reading /REMOVED_DIR/0016/surf/lh.sphere.reg Read /REMOVED_DIR/0016/mri/T1.mgz Surface area: 861.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 17/25 0017... Reading /REMOVED_DIR/0017/surf/lh.sphere.reg Read /REMOVED_DIR/0017/mri/T1.mgz Surface area: 855.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 18/25 0018... Reading /REMOVED_DIR/0018/surf/lh.sphere.reg Read /REMOVED_DIR/0018/mri/T1.mgz Surface area: 866.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 19/25 0019... Reading /REMOVED_DIR/0019/surf/lh.sphere.reg Read /REMOVED_DIR/0019/mri/T1.mgz Surface area: 961.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 20/25 0020... Reading /REMOVED_DIR/0020/surf/lh.sphere.reg Read /REMOVED_DIR/0020/mri/T1.mgz Surface area: 828.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 21/25 0021... Reading /REMOVED_DIR/0021/surf/lh.sphere.reg Read /REMOVED_DIR/0021/mri/T1.mgz Surface area: 982.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 22/25 0022... Reading /REMOVED_DIR/0022/surf/lh.sphere.reg Read /REMOVED_DIR/0022/mri/T1.mgz Surface area: 964.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 23/25 0023... Reading /REMOVED_DIR/0023/surf/lh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 824.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 24/25 0024... Reading /REMOVED_DIR/0024/surf/lh.sphere.reg Read /REMOVED_DIR/0024/mri/T1.mgz Surface area: 811.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 25/25 0025... Reading /REMOVED_DIR/0025/surf/lh.sphere.reg Read /REMOVED_DIR/0025/mri/T1.mgz Surface area: 832.3 cm^2 Applying linear transform Finished loading all data Avg surf area = 878.083 cm Reading icosahedron from /usr/local/freesurfer/lib/bem/ic7.tri... setting group surface area to be 878.1 cm^2 (scale=1.13) Adding volume geometry from /usr/local/freesurfer/average/mni305.cor.mgz writing average orig surface to /REMOVED_DIR/avg_elder/surf/lh.orig writing group avg surface area 878 cm^2 into surface file mris_make_average_surface done --------------------------------------------------- #@# Smoothing, inflating, etc lh ---------------- /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/surf mris_smooth -nw -n 5 ./lh.white ./lh.smoothwm writing group avg surface area 929 cm^2 into surface file mris_inflate -dist .01 -f .001 -no-save-sulc -n 15 ./lh.smoothwm ./lh.inflated Not saving sulc Reading ./lh.smoothwm step 000: RMS=0.081 (target=0.001) step 005: RMS=0.067 (target=0.001) step 010: RMS=0.052 (target=0.001) step 015: RMS=0.043 (target=0.001) step 020: RMS=0.036 (target=0.001) step 025: RMS=0.032 (target=0.001) step 030: RMS=0.028 (target=0.001) step 035: RMS=0.024 (target=0.001) step 040: RMS=0.022 (target=0.001) step 045: RMS=0.019 (target=0.001) step 050: RMS=0.018 (target=0.001) step 055: RMS=0.017 (target=0.001) step 060: RMS=0.016 (target=0.001) step 065: RMS=0.015 (target=0.001) step 070: RMS=0.014 (target=0.001) step 075: RMS=0.014 (target=0.001) step 080: RMS=0.013 (target=0.001) step 085: RMS=0.013 (target=0.001) step 090: RMS=0.013 (target=0.001) inflation complete. writing group avg surface area 929 cm^2 into surface file Not saving sulc mris_inflate utimesec 146.692000 mris_inflate stimesec 0.212000 mris_inflate ru_maxrss 203880 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 49416 mris_inflate ru_majflt 0 mris_inflate ru_nswap 0 mris_inflate ru_inblock 0 mris_inflate ru_oublock 11528 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 82 mris_inflate ru_nivcsw 119 annot2std --o label/lh.aparc.annot --lh --f /REMOVED_DIR/avg_elder/list.subjects.txt --t avg_elder --a aparc --srcsurfreg sphere.reg --trgsurfreg sphere.reg Wed Jul 3 14:18:44 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/annot2std --o label/lh.aparc.annot --lh --f /REMOVED_DIR/avg_elder/list.subjects.txt --t avg_elder --a aparc --srcsurfreg sphere.reg --trgsurfreg sphere.reg freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c $Id: annot2std,v 1.5 2016/06/13 18:00:34 greve Exp $ Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux #@# 1/25 0001 Wed Jul 3 14:18:44 CEST 2019 mri_annotation2label --subject 0001 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.ctab --annotation aparc --segbase 0 subject = 0001 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.mgh surface = white Reading surface /REMOVED_DIR/0001/surf/lh.white Loading annotations from /REMOVED_DIR/0001/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0001 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0001 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 18735 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70159, nSrcLost = 18735, nSrcMulti = 58774, MnSrcMultiHits = 1.59395 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.std.mgh #@# 2/25 0002 Wed Jul 3 14:18:55 CEST 2019 mri_annotation2label --subject 0002 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.ctab --annotation aparc --segbase 0 subject = 0002 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.mgh surface = white Reading surface /REMOVED_DIR/0002/surf/lh.white Loading annotations from /REMOVED_DIR/0002/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0002 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0002 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 22726 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 81421, nSrcLost = 22726, nSrcMulti = 59457, MnSrcMultiHits = 1.38623 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.std.mgh #@# 3/25 0003 Wed Jul 3 14:19:07 CEST 2019 mri_annotation2label --subject 0003 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.ctab --annotation aparc --segbase 0 subject = 0003 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.mgh surface = white Reading surface /REMOVED_DIR/0003/surf/lh.white Loading annotations from /REMOVED_DIR/0003/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0003 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0003 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19862 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 77444, nSrcLost = 19862, nSrcMulti = 58025, MnSrcMultiHits = 1.48898 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.std.mgh #@# 4/25 0004 Wed Jul 3 14:19:18 CEST 2019 mri_annotation2label --subject 0004 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.ctab --annotation aparc --segbase 0 subject = 0004 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.mgh surface = white Reading surface /REMOVED_DIR/0004/surf/lh.white Loading annotations from /REMOVED_DIR/0004/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0004 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0004 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 25322 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 86646, nSrcLost = 25322, nSrcMulti = 59776, MnSrcMultiHits = 1.29142 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.std.mgh #@# 5/25 0005 Wed Jul 3 14:19:30 CEST 2019 mri_annotation2label --subject 0005 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.ctab --annotation aparc --segbase 0 subject = 0005 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.mgh surface = white Reading surface /REMOVED_DIR/0005/surf/lh.white Loading annotations from /REMOVED_DIR/0005/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0005 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0005 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 21893 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 78359, nSrcLost = 21893, nSrcMulti = 59701, MnSrcMultiHits = 1.43185 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.std.mgh #@# 6/25 0006 Wed Jul 3 14:19:41 CEST 2019 mri_annotation2label --subject 0006 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.ctab --annotation aparc --segbase 0 subject = 0006 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.mgh surface = white Reading surface /REMOVED_DIR/0006/surf/lh.white Loading annotations from /REMOVED_DIR/0006/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0006 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0006 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 25458 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 84534, nSrcLost = 25458, nSrcMulti = 60976, MnSrcMultiHits = 1.30064 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.std.mgh #@# 7/25 0023 Wed Jul 3 14:19:53 CEST 2019 mri_annotation2label --subject 0023 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.ctab --annotation aparc --segbase 0 subject = 0023 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.mgh surface = white Reading surface /REMOVED_DIR/0023/surf/lh.white Loading annotations from /REMOVED_DIR/0023/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17045 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70694, nSrcLost = 17045, nSrcMulti = 58118, MnSrcMultiHits = 1.60274 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.std.mgh #@# 8/25 0008 Wed Jul 3 14:20:04 CEST 2019 mri_annotation2label --subject 0008 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.ctab --annotation aparc --segbase 0 subject = 0008 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.mgh surface = white Reading surface /REMOVED_DIR/0008/surf/lh.white Loading annotations from /REMOVED_DIR/0008/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0008 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0008 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 15510 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 64621, nSrcLost = 15510, nSrcMulti = 58114, MnSrcMultiHits = 1.70735 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.std.mgh #@# 9/25 0009 Wed Jul 3 14:20:15 CEST 2019 mri_annotation2label --subject 0009 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.ctab --annotation aparc --segbase 0 subject = 0009 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.mgh surface = white Reading surface /REMOVED_DIR/0009/surf/lh.white Loading annotations from /REMOVED_DIR/0009/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0009 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0009 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 23922 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 81546, nSrcLost = 23922, nSrcMulti = 60380, MnSrcMultiHits = 1.36297 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.std.mgh #@# 10/25 0010 Wed Jul 3 14:20:27 CEST 2019 mri_annotation2label --subject 0010 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.ctab --annotation aparc --segbase 0 subject = 0010 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.mgh surface = white Reading surface /REMOVED_DIR/0010/surf/lh.white Loading annotations from /REMOVED_DIR/0010/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0010 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0010 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 33341 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 93557, nSrcLost = 33341, nSrcMulti = 65084, MnSrcMultiHits = 1.07991 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.std.mgh #@# 11/25 0011 Wed Jul 3 14:20:39 CEST 2019 mri_annotation2label --subject 0011 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.ctab --annotation aparc --segbase 0 subject = 0011 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.mgh surface = white Reading surface /REMOVED_DIR/0011/surf/lh.white Loading annotations from /REMOVED_DIR/0011/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0011 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0011 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 25261 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 85694, nSrcLost = 25261, nSrcMulti = 60508, MnSrcMultiHits = 1.29153 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.std.mgh #@# 12/25 0012 Wed Jul 3 14:20:51 CEST 2019 mri_annotation2label --subject 0012 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.ctab --annotation aparc --segbase 0 subject = 0012 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.mgh surface = white Reading surface /REMOVED_DIR/0012/surf/lh.white Loading annotations from /REMOVED_DIR/0012/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0012 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0012 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19068 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 74235, nSrcLost = 19068, nSrcMulti = 58504, MnSrcMultiHits = 1.53164 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.std.mgh #@# 13/25 0013 Wed Jul 3 14:21:02 CEST 2019 mri_annotation2label --subject 0013 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.ctab --annotation aparc --segbase 0 subject = 0013 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.mgh surface = white Reading surface /REMOVED_DIR/0013/surf/lh.white Loading annotations from /REMOVED_DIR/0013/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0013 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0013 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 16485 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 69997, nSrcLost = 16485, nSrcMulti = 57314, MnSrcMultiHits = 1.63738 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.std.mgh #@# 14/25 0014 Wed Jul 3 14:21:12 CEST 2019 mri_annotation2label --subject 0014 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.ctab --annotation aparc --segbase 0 subject = 0014 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.mgh surface = white Reading surface /REMOVED_DIR/0014/surf/lh.white Loading annotations from /REMOVED_DIR/0014/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0014 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0014 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 23826 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 82161, nSrcLost = 23826, nSrcMulti = 60470, MnSrcMultiHits = 1.35077 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.std.mgh #@# 15/25 0015 Wed Jul 3 14:21:24 CEST 2019 mri_annotation2label --subject 0015 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.ctab --annotation aparc --segbase 0 subject = 0015 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.mgh surface = white Reading surface /REMOVED_DIR/0015/surf/lh.white Loading annotations from /REMOVED_DIR/0015/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0015 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0015 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 14824 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 65647, nSrcLost = 14824, nSrcMulti = 57273, MnSrcMultiHits = 1.71451 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.std.mgh #@# 16/25 0016 Wed Jul 3 14:21:34 CEST 2019 mri_annotation2label --subject 0016 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.ctab --annotation aparc --segbase 0 subject = 0016 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.mgh surface = white Reading surface /REMOVED_DIR/0016/surf/lh.white Loading annotations from /REMOVED_DIR/0016/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0016 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0016 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19462 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 76816, nSrcLost = 19462, nSrcMulti = 57970, MnSrcMultiHits = 1.50122 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.std.mgh #@# 17/25 0017 Wed Jul 3 14:21:46 CEST 2019 mri_annotation2label --subject 0017 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.ctab --annotation aparc --segbase 0 subject = 0017 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.mgh surface = white Reading surface /REMOVED_DIR/0017/surf/lh.white Loading annotations from /REMOVED_DIR/0017/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0017 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0017 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 20786 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 73535, nSrcLost = 20786, nSrcMulti = 59805, MnSrcMultiHits = 1.51002 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.std.mgh #@# 18/25 0018 Wed Jul 3 14:21:57 CEST 2019 mri_annotation2label --subject 0018 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.ctab --annotation aparc --segbase 0 subject = 0018 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.mgh surface = white Reading surface /REMOVED_DIR/0018/surf/lh.white Loading annotations from /REMOVED_DIR/0018/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0018 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0018 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 20917 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 76445, nSrcLost = 20917, nSrcMulti = 59309, MnSrcMultiHits = 1.47359 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.std.mgh #@# 19/25 0019 Wed Jul 3 14:22:08 CEST 2019 mri_annotation2label --subject 0019 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.ctab --annotation aparc --segbase 0 subject = 0019 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.mgh surface = white Reading surface /REMOVED_DIR/0019/surf/lh.white Loading annotations from /REMOVED_DIR/0019/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0019 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0019 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 27542 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 89073, nSrcLost = 27542, nSrcMulti = 61164, MnSrcMultiHits = 1.22243 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.std.mgh #@# 20/25 0020 Wed Jul 3 14:22:20 CEST 2019 mri_annotation2label --subject 0020 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.ctab --annotation aparc --segbase 0 subject = 0020 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.mgh surface = white Reading surface /REMOVED_DIR/0020/surf/lh.white Loading annotations from /REMOVED_DIR/0020/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0020 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0020 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17755 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 72057, nSrcLost = 17755, nSrcMulti = 57714, MnSrcMultiHits = 1.59034 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.std.mgh #@# 21/25 0021 Wed Jul 3 14:22:30 CEST 2019 mri_annotation2label --subject 0021 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.ctab --annotation aparc --segbase 0 subject = 0021 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.mgh surface = white Reading surface /REMOVED_DIR/0021/surf/lh.white Loading annotations from /REMOVED_DIR/0021/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0021 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0021 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 27740 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 93307, nSrcLost = 27740, nSrcMulti = 59894, MnSrcMultiHits = 1.17766 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.std.mgh #@# 22/25 0022 Wed Jul 3 14:22:43 CEST 2019 mri_annotation2label --subject 0022 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.ctab --annotation aparc --segbase 0 subject = 0022 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.mgh surface = white Reading surface /REMOVED_DIR/0022/surf/lh.white Loading annotations from /REMOVED_DIR/0022/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0022 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0022 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 26917 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 91270, nSrcLost = 26917, nSrcMulti = 59852, MnSrcMultiHits = 1.21252 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.std.mgh #@# 23/25 0023 Wed Jul 3 14:22:54 CEST 2019 mri_annotation2label --subject 0023 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.ctab --annotation aparc --segbase 0 subject = 0023 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.mgh surface = white Reading surface /REMOVED_DIR/0023/surf/lh.white Loading annotations from /REMOVED_DIR/0023/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17045 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70694, nSrcLost = 17045, nSrcMulti = 58118, MnSrcMultiHits = 1.60274 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.std.mgh #@# 24/25 0024 Wed Jul 3 14:23:05 CEST 2019 mri_annotation2label --subject 0024 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.ctab --annotation aparc --segbase 0 subject = 0024 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.mgh surface = white Reading surface /REMOVED_DIR/0024/surf/lh.white Loading annotations from /REMOVED_DIR/0024/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0024 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0024 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 15877 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 69857, nSrcLost = 15877, nSrcMulti = 56826, MnSrcMultiHits = 1.65391 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.std.mgh #@# 25/25 0025 Wed Jul 3 14:23:15 CEST 2019 mri_annotation2label --subject 0025 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.ctab --annotation aparc --segbase 0 subject = 0025 annotation = aparc hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.mgh surface = white Reading surface /REMOVED_DIR/0025/surf/lh.white Loading annotations from /REMOVED_DIR/0025/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0025 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0025 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 18369 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 72746, nSrcLost = 18369, nSrcMulti = 58110, MnSrcMultiHits = 1.56765 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.std.mgh mri_concat /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.2.0002.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.3.0003.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.4.0004.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.5.0005.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.6.0006.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.7.0023.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.8.0008.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.9.0009.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.10.0010.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.11.0011.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.12.0012.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.13.0013.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.14.0014.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.15.0015.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.16.0016.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.17.0017.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.18.0018.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.19.0019.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.20.0020.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.21.0021.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.22.0022.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.23.0023.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.24.0024.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.25.0025.std.mgh --vote --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.vote.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Voting MRIvote: sorting MRIvote: done sorting Writing to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.vote.mgh mri_convert --frame 1 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.vote.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.annot.p.mgh mri_convert.bin --frame 1 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.vote.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.annot.p.mgh $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.vote.mgh... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) keeping frame 1 writing to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.annot.p.mgh... mris_seg2annot --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.vote.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.ctab --s avg_elder --hemi lh --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.annot $Id: mris_seg2annot.c,v 1.10 2014/11/15 00:07:19 greve Exp $ cwd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder cmdline mris_seg2annot --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.vote.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.ctab --s avg_elder --hemi lh --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.annot sysname Linux hostname hyades02 machine x86_64 user mje subject avg_elder hemi lh surfseg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.vote.mgh ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.ctab annotfile /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.annot Reading surface seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.vote.mgh Reading surface /REMOVED_DIR/avg_elder/surf/lh.white Reading ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.27550/seg.1.0001.ctab Writing annot to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.annot Started at Wed Jul 3 14:18:44 CEST 2019 Ended at Wed Jul 3 14:23:29 CEST 2019 Annot2std-Run-Time-Sec 285 annot2std Done annot2std --o label/lh.aparc.a2009s.annot --lh --f /REMOVED_DIR/avg_elder/list.subjects.txt --t avg_elder --a aparc.a2009s --srcsurfreg sphere.reg --trgsurfreg sphere.reg Wed Jul 3 14:23:30 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/annot2std --o label/lh.aparc.a2009s.annot --lh --f /REMOVED_DIR/avg_elder/list.subjects.txt --t avg_elder --a aparc.a2009s --srcsurfreg sphere.reg --trgsurfreg sphere.reg freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c $Id: annot2std,v 1.5 2016/06/13 18:00:34 greve Exp $ Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux #@# 1/25 0001 Wed Jul 3 14:23:30 CEST 2019 mri_annotation2label --subject 0001 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.ctab --annotation aparc.a2009s --segbase 0 subject = 0001 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.mgh surface = white Reading surface /REMOVED_DIR/0001/surf/lh.white Loading annotations from /REMOVED_DIR/0001/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0001 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0001 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 18735 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70159, nSrcLost = 18735, nSrcMulti = 58774, MnSrcMultiHits = 1.59395 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.std.mgh #@# 2/25 0002 Wed Jul 3 14:23:40 CEST 2019 mri_annotation2label --subject 0002 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.ctab --annotation aparc.a2009s --segbase 0 subject = 0002 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.mgh surface = white Reading surface /REMOVED_DIR/0002/surf/lh.white Loading annotations from /REMOVED_DIR/0002/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0002 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0002 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 22726 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 81421, nSrcLost = 22726, nSrcMulti = 59457, MnSrcMultiHits = 1.38623 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.std.mgh #@# 3/25 0003 Wed Jul 3 14:23:51 CEST 2019 mri_annotation2label --subject 0003 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.ctab --annotation aparc.a2009s --segbase 0 subject = 0003 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.mgh surface = white Reading surface /REMOVED_DIR/0003/surf/lh.white Loading annotations from /REMOVED_DIR/0003/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0003 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0003 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19862 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 77444, nSrcLost = 19862, nSrcMulti = 58025, MnSrcMultiHits = 1.48898 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.std.mgh #@# 4/25 0004 Wed Jul 3 14:24:02 CEST 2019 mri_annotation2label --subject 0004 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.ctab --annotation aparc.a2009s --segbase 0 subject = 0004 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.mgh surface = white Reading surface /REMOVED_DIR/0004/surf/lh.white Loading annotations from /REMOVED_DIR/0004/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0004 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0004 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 25322 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 86646, nSrcLost = 25322, nSrcMulti = 59776, MnSrcMultiHits = 1.29142 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.std.mgh #@# 5/25 0005 Wed Jul 3 14:24:13 CEST 2019 mri_annotation2label --subject 0005 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.ctab --annotation aparc.a2009s --segbase 0 subject = 0005 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.mgh surface = white Reading surface /REMOVED_DIR/0005/surf/lh.white Loading annotations from /REMOVED_DIR/0005/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0005 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0005 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 21893 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 78359, nSrcLost = 21893, nSrcMulti = 59701, MnSrcMultiHits = 1.43185 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.std.mgh #@# 6/25 0006 Wed Jul 3 14:24:24 CEST 2019 mri_annotation2label --subject 0006 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.ctab --annotation aparc.a2009s --segbase 0 subject = 0006 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.mgh surface = white Reading surface /REMOVED_DIR/0006/surf/lh.white Loading annotations from /REMOVED_DIR/0006/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0006 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0006 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 25458 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 84534, nSrcLost = 25458, nSrcMulti = 60976, MnSrcMultiHits = 1.30064 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.std.mgh #@# 7/25 0023 Wed Jul 3 14:24:36 CEST 2019 mri_annotation2label --subject 0023 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.ctab --annotation aparc.a2009s --segbase 0 subject = 0023 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.mgh surface = white Reading surface /REMOVED_DIR/0023/surf/lh.white Loading annotations from /REMOVED_DIR/0023/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17045 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70694, nSrcLost = 17045, nSrcMulti = 58118, MnSrcMultiHits = 1.60274 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.std.mgh #@# 8/25 0008 Wed Jul 3 14:24:46 CEST 2019 mri_annotation2label --subject 0008 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.ctab --annotation aparc.a2009s --segbase 0 subject = 0008 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.mgh surface = white Reading surface /REMOVED_DIR/0008/surf/lh.white Loading annotations from /REMOVED_DIR/0008/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0008 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0008 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 15510 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 64621, nSrcLost = 15510, nSrcMulti = 58114, MnSrcMultiHits = 1.70735 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.std.mgh #@# 9/25 0009 Wed Jul 3 14:24:56 CEST 2019 mri_annotation2label --subject 0009 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.ctab --annotation aparc.a2009s --segbase 0 subject = 0009 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.mgh surface = white Reading surface /REMOVED_DIR/0009/surf/lh.white Loading annotations from /REMOVED_DIR/0009/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0009 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0009 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 23922 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 81546, nSrcLost = 23922, nSrcMulti = 60380, MnSrcMultiHits = 1.36297 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.std.mgh #@# 10/25 0010 Wed Jul 3 14:25:08 CEST 2019 mri_annotation2label --subject 0010 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.ctab --annotation aparc.a2009s --segbase 0 subject = 0010 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.mgh surface = white Reading surface /REMOVED_DIR/0010/surf/lh.white Loading annotations from /REMOVED_DIR/0010/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0010 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0010 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 33341 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 93557, nSrcLost = 33341, nSrcMulti = 65084, MnSrcMultiHits = 1.07991 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.std.mgh #@# 11/25 0011 Wed Jul 3 14:25:20 CEST 2019 mri_annotation2label --subject 0011 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.ctab --annotation aparc.a2009s --segbase 0 subject = 0011 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.mgh surface = white Reading surface /REMOVED_DIR/0011/surf/lh.white Loading annotations from /REMOVED_DIR/0011/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0011 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0011 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 25261 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 85694, nSrcLost = 25261, nSrcMulti = 60508, MnSrcMultiHits = 1.29153 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.std.mgh #@# 12/25 0012 Wed Jul 3 14:25:32 CEST 2019 mri_annotation2label --subject 0012 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.ctab --annotation aparc.a2009s --segbase 0 subject = 0012 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.mgh surface = white Reading surface /REMOVED_DIR/0012/surf/lh.white Loading annotations from /REMOVED_DIR/0012/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0012 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0012 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19068 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 74235, nSrcLost = 19068, nSrcMulti = 58504, MnSrcMultiHits = 1.53164 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.std.mgh #@# 13/25 0013 Wed Jul 3 14:25:42 CEST 2019 mri_annotation2label --subject 0013 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.ctab --annotation aparc.a2009s --segbase 0 subject = 0013 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.mgh surface = white Reading surface /REMOVED_DIR/0013/surf/lh.white Loading annotations from /REMOVED_DIR/0013/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0013 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0013 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 16485 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 69997, nSrcLost = 16485, nSrcMulti = 57314, MnSrcMultiHits = 1.63738 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.std.mgh #@# 14/25 0014 Wed Jul 3 14:25:53 CEST 2019 mri_annotation2label --subject 0014 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.ctab --annotation aparc.a2009s --segbase 0 subject = 0014 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.mgh surface = white Reading surface /REMOVED_DIR/0014/surf/lh.white Loading annotations from /REMOVED_DIR/0014/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0014 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0014 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 23826 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 82161, nSrcLost = 23826, nSrcMulti = 60470, MnSrcMultiHits = 1.35077 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.std.mgh #@# 15/25 0015 Wed Jul 3 14:26:04 CEST 2019 mri_annotation2label --subject 0015 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.ctab --annotation aparc.a2009s --segbase 0 subject = 0015 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.mgh surface = white Reading surface /REMOVED_DIR/0015/surf/lh.white Loading annotations from /REMOVED_DIR/0015/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0015 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0015 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 14824 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 65647, nSrcLost = 14824, nSrcMulti = 57273, MnSrcMultiHits = 1.71451 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.std.mgh #@# 16/25 0016 Wed Jul 3 14:26:14 CEST 2019 mri_annotation2label --subject 0016 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.ctab --annotation aparc.a2009s --segbase 0 subject = 0016 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.mgh surface = white Reading surface /REMOVED_DIR/0016/surf/lh.white Loading annotations from /REMOVED_DIR/0016/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0016 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0016 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19462 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 76816, nSrcLost = 19462, nSrcMulti = 57970, MnSrcMultiHits = 1.50122 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.std.mgh #@# 17/25 0017 Wed Jul 3 14:26:26 CEST 2019 mri_annotation2label --subject 0017 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.ctab --annotation aparc.a2009s --segbase 0 subject = 0017 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.mgh surface = white Reading surface /REMOVED_DIR/0017/surf/lh.white Loading annotations from /REMOVED_DIR/0017/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0017 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0017 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 20786 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 73535, nSrcLost = 20786, nSrcMulti = 59805, MnSrcMultiHits = 1.51002 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.std.mgh #@# 18/25 0018 Wed Jul 3 14:26:37 CEST 2019 mri_annotation2label --subject 0018 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.ctab --annotation aparc.a2009s --segbase 0 subject = 0018 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.mgh surface = white Reading surface /REMOVED_DIR/0018/surf/lh.white Loading annotations from /REMOVED_DIR/0018/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0018 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0018 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 20917 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 76445, nSrcLost = 20917, nSrcMulti = 59309, MnSrcMultiHits = 1.47359 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.std.mgh #@# 19/25 0019 Wed Jul 3 14:26:49 CEST 2019 mri_annotation2label --subject 0019 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.ctab --annotation aparc.a2009s --segbase 0 subject = 0019 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.mgh surface = white Reading surface /REMOVED_DIR/0019/surf/lh.white Loading annotations from /REMOVED_DIR/0019/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0019 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0019 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 27542 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 89073, nSrcLost = 27542, nSrcMulti = 61164, MnSrcMultiHits = 1.22243 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.std.mgh #@# 20/25 0020 Wed Jul 3 14:27:01 CEST 2019 mri_annotation2label --subject 0020 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.ctab --annotation aparc.a2009s --segbase 0 subject = 0020 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.mgh surface = white Reading surface /REMOVED_DIR/0020/surf/lh.white Loading annotations from /REMOVED_DIR/0020/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0020 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0020 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17755 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 72057, nSrcLost = 17755, nSrcMulti = 57714, MnSrcMultiHits = 1.59034 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.std.mgh #@# 21/25 0021 Wed Jul 3 14:27:11 CEST 2019 mri_annotation2label --subject 0021 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.ctab --annotation aparc.a2009s --segbase 0 subject = 0021 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.mgh surface = white Reading surface /REMOVED_DIR/0021/surf/lh.white Loading annotations from /REMOVED_DIR/0021/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0021 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0021 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 27740 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 93307, nSrcLost = 27740, nSrcMulti = 59894, MnSrcMultiHits = 1.17766 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.std.mgh #@# 22/25 0022 Wed Jul 3 14:27:24 CEST 2019 mri_annotation2label --subject 0022 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.ctab --annotation aparc.a2009s --segbase 0 subject = 0022 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.mgh surface = white Reading surface /REMOVED_DIR/0022/surf/lh.white Loading annotations from /REMOVED_DIR/0022/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0022 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0022 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 26917 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 91270, nSrcLost = 26917, nSrcMulti = 59852, MnSrcMultiHits = 1.21252 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.std.mgh #@# 23/25 0023 Wed Jul 3 14:27:35 CEST 2019 mri_annotation2label --subject 0023 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.ctab --annotation aparc.a2009s --segbase 0 subject = 0023 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.mgh surface = white Reading surface /REMOVED_DIR/0023/surf/lh.white Loading annotations from /REMOVED_DIR/0023/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17045 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70694, nSrcLost = 17045, nSrcMulti = 58118, MnSrcMultiHits = 1.60274 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.std.mgh #@# 24/25 0024 Wed Jul 3 14:27:46 CEST 2019 mri_annotation2label --subject 0024 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.ctab --annotation aparc.a2009s --segbase 0 subject = 0024 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.mgh surface = white Reading surface /REMOVED_DIR/0024/surf/lh.white Loading annotations from /REMOVED_DIR/0024/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0024 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0024 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 15877 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 69857, nSrcLost = 15877, nSrcMulti = 56826, MnSrcMultiHits = 1.65391 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.std.mgh #@# 25/25 0025 Wed Jul 3 14:27:57 CEST 2019 mri_annotation2label --subject 0025 --hemi lh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.ctab --annotation aparc.a2009s --segbase 0 subject = 0025 annotation = aparc.a2009s hemi = lh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.mgh surface = white Reading surface /REMOVED_DIR/0025/surf/lh.white Loading annotations from /REMOVED_DIR/0025/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0025 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi lh --srcsubject 0025 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/lh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 18369 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 72746, nSrcLost = 18369, nSrcMulti = 58110, MnSrcMultiHits = 1.56765 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.std.mgh mri_concat /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.2.0002.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.3.0003.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.4.0004.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.5.0005.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.6.0006.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.7.0023.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.8.0008.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.9.0009.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.10.0010.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.11.0011.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.12.0012.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.13.0013.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.14.0014.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.15.0015.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.16.0016.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.17.0017.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.18.0018.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.19.0019.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.20.0020.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.21.0021.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.22.0022.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.23.0023.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.24.0024.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.25.0025.std.mgh --vote --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.vote.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Voting MRIvote: sorting MRIvote: done sorting Writing to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.vote.mgh mri_convert --frame 1 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.vote.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.a2009s.annot.p.mgh mri_convert.bin --frame 1 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.vote.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.a2009s.annot.p.mgh $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.vote.mgh... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) keeping frame 1 writing to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.a2009s.annot.p.mgh... mris_seg2annot --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.vote.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.ctab --s avg_elder --hemi lh --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.a2009s.annot $Id: mris_seg2annot.c,v 1.10 2014/11/15 00:07:19 greve Exp $ cwd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder cmdline mris_seg2annot --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.vote.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.ctab --s avg_elder --hemi lh --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.a2009s.annot sysname Linux hostname hyades02 machine x86_64 user mje subject avg_elder hemi lh surfseg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.vote.mgh ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.ctab annotfile /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.a2009s.annot Reading surface seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.vote.mgh Reading surface /REMOVED_DIR/avg_elder/surf/lh.white Reading ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.ctab Writing annot to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/lh.aparc.a2009s.annot Started at Wed Jul 3 14:23:30 CEST 2019 Ended at Wed Jul 3 14:28:11 CEST 2019 Annot2std-Run-Time-Sec 281 annot2std Done mri_annotation2label --subject avg_elder --hemi lh --outdir /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314 --annotation aparc.a2009s subject = avg_elder annotation = aparc.a2009s hemi = lh outdir = /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314 surface = white Reading surface /REMOVED_DIR/avg_elder/surf/lh.white Loading annotations from /REMOVED_DIR/avg_elder/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.30043/seg.1.0001.ctab) Seg base 11100 max index = 75 0 11462 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.Unknown.label 1 975 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G&S_frontomargin.label 2 1458 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G&S_occipital_inf.label 3 2380 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G&S_paracentral.label 4 2480 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G&S_subcentral.label 5 629 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G&S_transv_frontopol.label 6 2351 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G&S_cingul-Ant.label 7 1814 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G&S_cingul-Mid-Ant.label 8 2479 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G&S_cingul-Mid-Post.label 9 1043 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_cingul-Post-dorsal.label 10 694 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_cingul-Post-ventral.label 11 1592 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_cuneus.label 12 1915 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_front_inf-Opercular.label 13 481 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_front_inf-Orbital.label 14 1091 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_front_inf-Triangul.label 15 4071 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_front_middle.label 16 8600 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_front_sup.label 17 1249 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_Ins_lg&S_cent_ins.label 18 1226 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_insular_short.label 19 2115 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_occipital_middle.label 20 1232 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_occipital_sup.label 21 1777 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_oc-temp_lat-fusifor.label 22 2538 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_oc-temp_med-Lingual.label 23 1984 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_oc-temp_med-Parahip.label 24 2334 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_orbital.label 25 2885 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_pariet_inf-Angular.label 26 4350 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_pariet_inf-Supramar.label 27 4205 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_parietal_sup.label 28 3188 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_postcentral.label 29 3763 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_precentral.label 30 3656 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_precuneus.label 31 1006 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_rectus.label 32 1109 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_subcallosal.label 33 791 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_temp_sup-G_T_transv.label 34 2348 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_temp_sup-Lateral.label 35 994 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_temp_sup-Plan_polar.label 36 1509 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_temp_sup-Plan_tempo.label 37 2131 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_temporal_inf.label 38 2353 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.G_temporal_middle.label 39 429 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.Lat_Fis-ant-Horizont.label 40 472 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.Lat_Fis-ant-Vertical.label 41 2046 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.Lat_Fis-post.label 42 0 empty --- skipping 43 1714 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.Pole_occipital.label 44 1507 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.Pole_temporal.label 45 3052 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_calcarine.label 46 4965 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_central.label 47 1904 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_cingul-Marginalis.label 48 863 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_circular_insula_ant.label 49 2239 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_circular_insula_inf.label 50 3042 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_circular_insula_sup.label 51 1143 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_collat_transv_ant.label 52 411 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_collat_transv_post.label 53 2232 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_front_inf.label 54 1271 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_front_middle.label 55 3323 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_front_sup.label 56 419 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_interm_prim-Jensen.label 57 4486 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_intrapariet&P_trans.label 58 1105 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_oc_middle&Lunatus.label 59 1414 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_oc_sup&transversal.label 60 747 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_occipital_ant.label 61 876 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_oc-temp_lat.label 62 2469 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_oc-temp_med&Lingual.label 63 378 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_orbital_lateral.label 64 743 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_orbital_med-olfact.label 65 1309 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_orbital-H_Shaped.label 66 2558 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_parieto_occipital.label 67 2598 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_pericallosal.label 68 4562 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_postcentral.label 69 2145 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_precentral-inf-part.label 70 1792 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_precentral-sup-part.label 71 822 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_suborbital.label 72 1285 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_subparietal.label 73 1533 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_temporal_inf.label 74 7215 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_temporal_sup.label 75 515 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/lh.S_temporal_transverse.label mri_mergelabels -o /REMOVED_DIR/avg_elder/label/lh.cortex.label -d /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314 Done mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.sulc.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas sulc --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.sulc.log nsubjects = 25 tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.sulc.log Wed Jul 3 14:28:20 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.sulc.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas sulc --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.sulc.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 14:28:20 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128933) Reverse Loop had 18735 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148497, nTrgMulti = 15345, MnTrgMultiHits = 2.22092 nSrc121 = 88894, nSrcLost = 0, nSrcMulti = 40039, MnSrcMultiHits = 2.33979 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 14:28:30 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (140878) Reverse Loop had 22726 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145305, nTrgMulti = 18537, MnTrgMultiHits = 2.22598 nSrc121 = 104147, nSrcLost = 0, nSrcMulti = 36731, MnSrcMultiHits = 2.24391 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 14:28:40 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135469) Reverse Loop had 19862 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147429, nTrgMulti = 16413, MnTrgMultiHits = 2.21014 nSrc121 = 97306, nSrcLost = 0, nSrcMulti = 38163, MnSrcMultiHits = 2.26392 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 14:28:50 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146422) Reverse Loop had 25322 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143298, nTrgMulti = 20544, MnTrgMultiHits = 2.23257 nSrc121 = 111968, nSrcLost = 0, nSrcMulti = 34454, MnSrcMultiHits = 2.24055 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 14:29:00 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (138060) Reverse Loop had 21893 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146063, nTrgMulti = 17779, MnTrgMultiHits = 2.2314 nSrc121 = 100252, nSrcLost = 0, nSrcMulti = 37808, MnSrcMultiHits = 2.26098 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 14:29:10 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (145510) Reverse Loop had 25458 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143491, nTrgMulti = 20351, MnTrgMultiHits = 2.25095 nSrc121 = 109992, nSrcLost = 0, nSrcMulti = 35518, MnSrcMultiHits = 2.2329 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 14:29:21 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128812) Reverse Loop had 17045 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 14:29:31 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122735) Reverse Loop had 15510 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151209, nTrgMulti = 12633, MnTrgMultiHits = 2.22774 nSrc121 = 80131, nSrcLost = 0, nSrcMulti = 42604, MnSrcMultiHits = 2.32891 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 14:29:40 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141926) Reverse Loop had 23922 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144316, nTrgMulti = 19526, MnTrgMultiHits = 2.22514 nSrc121 = 105468, nSrcLost = 0, nSrcMulti = 36458, MnSrcMultiHits = 2.25728 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 14:29:51 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (158641) Reverse Loop had 33341 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 137465, nTrgMulti = 26377, MnTrgMultiHits = 2.26402 nSrc121 = 126898, nSrcLost = 0, nSrcMulti = 31743, MnSrcMultiHits = 2.21419 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 14:30:02 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146202) Reverse Loop had 25261 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143504, nTrgMulti = 20338, MnTrgMultiHits = 2.24206 nSrc121 = 110955, nSrcLost = 0, nSrcMulti = 35247, MnSrcMultiHits = 2.21715 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 14:30:13 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (132739) Reverse Loop had 19068 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148490, nTrgMulti = 15352, MnTrgMultiHits = 2.24205 nSrc121 = 93303, nSrcLost = 0, nSrcMulti = 39436, MnSrcMultiHits = 2.27221 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 14:30:23 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (127311) Reverse Loop had 16485 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 150338, nTrgMulti = 13504, MnTrgMultiHits = 2.22075 nSrc121 = 86482, nSrcLost = 0, nSrcMulti = 40829, MnSrcMultiHits = 2.29849 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 14:30:32 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (142631) Reverse Loop had 23826 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144814, nTrgMulti = 19028, MnTrgMultiHits = 2.25215 nSrc121 = 105987, nSrcLost = 0, nSrcMulti = 36644, MnSrcMultiHits = 2.22904 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 14:30:42 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122920) Reverse Loop had 14824 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151677, nTrgMulti = 12165, MnTrgMultiHits = 2.21858 nSrc121 = 80471, nSrcLost = 0, nSrcMulti = 42449, MnSrcMultiHits = 2.31325 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 14:30:52 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134786) Reverse Loop had 19462 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147830, nTrgMulti = 16012, MnTrgMultiHits = 2.21546 nSrc121 = 96278, nSrcLost = 0, nSrcMulti = 38508, MnSrcMultiHits = 2.25995 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 14:31:01 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (133340) Reverse Loop had 20786 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147017, nTrgMulti = 16825, MnTrgMultiHits = 2.23542 nSrc121 = 94321, nSrcLost = 0, nSrcMulti = 39019, MnSrcMultiHits = 2.31444 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 14:31:12 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135754) Reverse Loop had 20917 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146789, nTrgMulti = 17053, MnTrgMultiHits = 2.22659 nSrc121 = 97362, nSrcLost = 0, nSrcMulti = 38392, MnSrcMultiHits = 2.27644 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 14:31:22 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (150237) Reverse Loop had 27542 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141740, nTrgMulti = 22102, MnTrgMultiHits = 2.24613 nSrc121 = 116615, nSrcLost = 0, nSrcMulti = 33622, MnSrcMultiHits = 2.22381 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 14:31:33 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (129771) Reverse Loop had 17755 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149208, nTrgMulti = 14634, MnTrgMultiHits = 2.21327 nSrc121 = 89812, nSrcLost = 0, nSrcMulti = 39959, MnSrcMultiHits = 2.29698 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 14:31:43 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (153201) Reverse Loop had 27740 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141217, nTrgMulti = 22625, MnTrgMultiHits = 2.22608 nSrc121 = 121047, nSrcLost = 0, nSrcMulti = 32154, MnSrcMultiHits = 2.19366 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 14:31:54 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (151122) Reverse Loop had 26917 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141783, nTrgMulti = 22059, MnTrgMultiHits = 2.22023 nSrc121 = 118187, nSrcLost = 0, nSrcMulti = 32935, MnSrcMultiHits = 2.20349 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 14:32:05 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128812) Reverse Loop had 17045 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 14:32:15 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (126683) Reverse Loop had 15877 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 150548, nTrgMulti = 13294, MnTrgMultiHits = 2.1943 nSrc121 = 85734, nSrcLost = 0, nSrcMulti = 40949, MnSrcMultiHits = 2.29517 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 14:32:24 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/lh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (130856) Reverse Loop had 18369 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148807, nTrgMulti = 15035, MnTrgMultiHits = 2.22175 nSrc121 = 91115, nSrcLost = 0, nSrcMulti = 39741, MnSrcMultiHits = 2.29224 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.lh.sulc.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.lh.sulc.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.32342 Wed Jul 3 14:32:35 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.sulc.mgh --mean --o /REMOVED_DIR/avg_elder/surf/lh.sulc.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/lh.sulc.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.sulc.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.lh.sulc.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.lh.sulc.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.sulc.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.sulc --trg_type curv --hemi lh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.sulc.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.sulc --trg_type curv --hemi lh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/lh.sulc.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/lh.sulc trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.curv.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas curv --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.curv.log nsubjects = 25 tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.curv.log Wed Jul 3 14:32:39 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.curv.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas curv --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.curv.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 14:32:39 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128933) Reverse Loop had 18735 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148497, nTrgMulti = 15345, MnTrgMultiHits = 2.22092 nSrc121 = 88894, nSrcLost = 0, nSrcMulti = 40039, MnSrcMultiHits = 2.33979 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 14:32:49 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (140878) Reverse Loop had 22726 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145305, nTrgMulti = 18537, MnTrgMultiHits = 2.22598 nSrc121 = 104147, nSrcLost = 0, nSrcMulti = 36731, MnSrcMultiHits = 2.24391 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 14:32:59 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135469) Reverse Loop had 19862 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147429, nTrgMulti = 16413, MnTrgMultiHits = 2.21014 nSrc121 = 97306, nSrcLost = 0, nSrcMulti = 38163, MnSrcMultiHits = 2.26392 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 14:33:09 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146422) Reverse Loop had 25322 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143298, nTrgMulti = 20544, MnTrgMultiHits = 2.23257 nSrc121 = 111968, nSrcLost = 0, nSrcMulti = 34454, MnSrcMultiHits = 2.24055 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 14:33:20 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (138060) Reverse Loop had 21893 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146063, nTrgMulti = 17779, MnTrgMultiHits = 2.2314 nSrc121 = 100252, nSrcLost = 0, nSrcMulti = 37808, MnSrcMultiHits = 2.26098 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 14:33:30 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (145510) Reverse Loop had 25458 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143491, nTrgMulti = 20351, MnTrgMultiHits = 2.25095 nSrc121 = 109992, nSrcLost = 0, nSrcMulti = 35518, MnSrcMultiHits = 2.2329 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 14:33:41 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128812) Reverse Loop had 17045 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 14:33:51 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122735) Reverse Loop had 15510 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151209, nTrgMulti = 12633, MnTrgMultiHits = 2.22774 nSrc121 = 80131, nSrcLost = 0, nSrcMulti = 42604, MnSrcMultiHits = 2.32891 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 14:34:00 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141926) Reverse Loop had 23922 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144316, nTrgMulti = 19526, MnTrgMultiHits = 2.22514 nSrc121 = 105468, nSrcLost = 0, nSrcMulti = 36458, MnSrcMultiHits = 2.25728 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 14:34:10 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (158641) Reverse Loop had 33341 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 137465, nTrgMulti = 26377, MnTrgMultiHits = 2.26402 nSrc121 = 126898, nSrcLost = 0, nSrcMulti = 31743, MnSrcMultiHits = 2.21419 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 14:34:22 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146202) Reverse Loop had 25261 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143504, nTrgMulti = 20338, MnTrgMultiHits = 2.24206 nSrc121 = 110955, nSrcLost = 0, nSrcMulti = 35247, MnSrcMultiHits = 2.21715 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 14:34:33 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (132739) Reverse Loop had 19068 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148490, nTrgMulti = 15352, MnTrgMultiHits = 2.24205 nSrc121 = 93303, nSrcLost = 0, nSrcMulti = 39436, MnSrcMultiHits = 2.27221 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 14:34:43 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (127311) Reverse Loop had 16485 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 150338, nTrgMulti = 13504, MnTrgMultiHits = 2.22075 nSrc121 = 86482, nSrcLost = 0, nSrcMulti = 40829, MnSrcMultiHits = 2.29849 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 14:34:52 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (142631) Reverse Loop had 23826 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144814, nTrgMulti = 19028, MnTrgMultiHits = 2.25215 nSrc121 = 105987, nSrcLost = 0, nSrcMulti = 36644, MnSrcMultiHits = 2.22904 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 14:35:03 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122920) Reverse Loop had 14824 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151677, nTrgMulti = 12165, MnTrgMultiHits = 2.21858 nSrc121 = 80471, nSrcLost = 0, nSrcMulti = 42449, MnSrcMultiHits = 2.31325 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 14:35:13 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134786) Reverse Loop had 19462 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147830, nTrgMulti = 16012, MnTrgMultiHits = 2.21546 nSrc121 = 96278, nSrcLost = 0, nSrcMulti = 38508, MnSrcMultiHits = 2.25995 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 14:35:23 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (133340) Reverse Loop had 20786 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147017, nTrgMulti = 16825, MnTrgMultiHits = 2.23542 nSrc121 = 94321, nSrcLost = 0, nSrcMulti = 39019, MnSrcMultiHits = 2.31444 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 14:35:33 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135754) Reverse Loop had 20917 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146789, nTrgMulti = 17053, MnTrgMultiHits = 2.22659 nSrc121 = 97362, nSrcLost = 0, nSrcMulti = 38392, MnSrcMultiHits = 2.27644 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 14:35:43 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (150237) Reverse Loop had 27542 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141740, nTrgMulti = 22102, MnTrgMultiHits = 2.24613 nSrc121 = 116615, nSrcLost = 0, nSrcMulti = 33622, MnSrcMultiHits = 2.22381 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 14:35:53 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (129771) Reverse Loop had 17755 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149208, nTrgMulti = 14634, MnTrgMultiHits = 2.21327 nSrc121 = 89812, nSrcLost = 0, nSrcMulti = 39959, MnSrcMultiHits = 2.29698 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 14:36:04 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (153201) Reverse Loop had 27740 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141217, nTrgMulti = 22625, MnTrgMultiHits = 2.22608 nSrc121 = 121047, nSrcLost = 0, nSrcMulti = 32154, MnSrcMultiHits = 2.19366 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 14:36:15 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (151122) Reverse Loop had 26917 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141783, nTrgMulti = 22059, MnTrgMultiHits = 2.22023 nSrc121 = 118187, nSrcLost = 0, nSrcMulti = 32935, MnSrcMultiHits = 2.20349 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 14:36:26 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128812) Reverse Loop had 17045 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 14:36:35 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (126683) Reverse Loop had 15877 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 150548, nTrgMulti = 13294, MnTrgMultiHits = 2.1943 nSrc121 = 85734, nSrcLost = 0, nSrcMulti = 40949, MnSrcMultiHits = 2.29517 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 14:36:44 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/lh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (130856) Reverse Loop had 18369 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148807, nTrgMulti = 15035, MnTrgMultiHits = 2.22175 nSrc121 = 91115, nSrcLost = 0, nSrcMulti = 39741, MnSrcMultiHits = 2.29224 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.lh.curv.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.lh.curv.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.2042 Wed Jul 3 14:36:55 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.curv.mgh --mean --o /REMOVED_DIR/avg_elder/surf/lh.curv.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/lh.curv.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.curv.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.lh.curv.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.lh.curv.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.curv.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.curv --trg_type curv --hemi lh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.curv.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.curv --trg_type curv --hemi lh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/lh.curv.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/lh.curv trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.thickness.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas thickness --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.thickness.log nsubjects = 25 tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.thickness.log Wed Jul 3 14:36:59 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.thickness.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas thickness --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.thickness.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 14:36:59 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128933) Reverse Loop had 18735 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148497, nTrgMulti = 15345, MnTrgMultiHits = 2.22092 nSrc121 = 88894, nSrcLost = 0, nSrcMulti = 40039, MnSrcMultiHits = 2.33979 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 14:37:09 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (140878) Reverse Loop had 22726 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145305, nTrgMulti = 18537, MnTrgMultiHits = 2.22598 nSrc121 = 104147, nSrcLost = 0, nSrcMulti = 36731, MnSrcMultiHits = 2.24391 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 14:37:19 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135469) Reverse Loop had 19862 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147429, nTrgMulti = 16413, MnTrgMultiHits = 2.21014 nSrc121 = 97306, nSrcLost = 0, nSrcMulti = 38163, MnSrcMultiHits = 2.26392 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 14:37:29 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146422) Reverse Loop had 25322 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143298, nTrgMulti = 20544, MnTrgMultiHits = 2.23257 nSrc121 = 111968, nSrcLost = 0, nSrcMulti = 34454, MnSrcMultiHits = 2.24055 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 14:37:40 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (138060) Reverse Loop had 21893 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146063, nTrgMulti = 17779, MnTrgMultiHits = 2.2314 nSrc121 = 100252, nSrcLost = 0, nSrcMulti = 37808, MnSrcMultiHits = 2.26098 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 14:37:50 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (145510) Reverse Loop had 25458 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143491, nTrgMulti = 20351, MnTrgMultiHits = 2.25095 nSrc121 = 109992, nSrcLost = 0, nSrcMulti = 35518, MnSrcMultiHits = 2.2329 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 14:38:01 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128812) Reverse Loop had 17045 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 14:38:11 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122735) Reverse Loop had 15510 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151209, nTrgMulti = 12633, MnTrgMultiHits = 2.22774 nSrc121 = 80131, nSrcLost = 0, nSrcMulti = 42604, MnSrcMultiHits = 2.32891 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 14:38:21 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141926) Reverse Loop had 23922 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144316, nTrgMulti = 19526, MnTrgMultiHits = 2.22514 nSrc121 = 105468, nSrcLost = 0, nSrcMulti = 36458, MnSrcMultiHits = 2.25728 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 14:38:33 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (158641) Reverse Loop had 33341 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 137465, nTrgMulti = 26377, MnTrgMultiHits = 2.26402 nSrc121 = 126898, nSrcLost = 0, nSrcMulti = 31743, MnSrcMultiHits = 2.21419 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 14:38:44 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146202) Reverse Loop had 25261 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143504, nTrgMulti = 20338, MnTrgMultiHits = 2.24206 nSrc121 = 110955, nSrcLost = 0, nSrcMulti = 35247, MnSrcMultiHits = 2.21715 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 14:38:55 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (132739) Reverse Loop had 19068 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148490, nTrgMulti = 15352, MnTrgMultiHits = 2.24205 nSrc121 = 93303, nSrcLost = 0, nSrcMulti = 39436, MnSrcMultiHits = 2.27221 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 14:39:05 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (127311) Reverse Loop had 16485 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 150338, nTrgMulti = 13504, MnTrgMultiHits = 2.22075 nSrc121 = 86482, nSrcLost = 0, nSrcMulti = 40829, MnSrcMultiHits = 2.29849 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 14:39:14 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (142631) Reverse Loop had 23826 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144814, nTrgMulti = 19028, MnTrgMultiHits = 2.25215 nSrc121 = 105987, nSrcLost = 0, nSrcMulti = 36644, MnSrcMultiHits = 2.22904 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 14:39:25 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122920) Reverse Loop had 14824 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151677, nTrgMulti = 12165, MnTrgMultiHits = 2.21858 nSrc121 = 80471, nSrcLost = 0, nSrcMulti = 42449, MnSrcMultiHits = 2.31325 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 14:39:34 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134786) Reverse Loop had 19462 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147830, nTrgMulti = 16012, MnTrgMultiHits = 2.21546 nSrc121 = 96278, nSrcLost = 0, nSrcMulti = 38508, MnSrcMultiHits = 2.25995 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 14:39:44 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (133340) Reverse Loop had 20786 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147017, nTrgMulti = 16825, MnTrgMultiHits = 2.23542 nSrc121 = 94321, nSrcLost = 0, nSrcMulti = 39019, MnSrcMultiHits = 2.31444 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 14:39:54 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135754) Reverse Loop had 20917 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146789, nTrgMulti = 17053, MnTrgMultiHits = 2.22659 nSrc121 = 97362, nSrcLost = 0, nSrcMulti = 38392, MnSrcMultiHits = 2.27644 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 14:40:04 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (150237) Reverse Loop had 27542 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141740, nTrgMulti = 22102, MnTrgMultiHits = 2.24613 nSrc121 = 116615, nSrcLost = 0, nSrcMulti = 33622, MnSrcMultiHits = 2.22381 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 14:40:15 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (129771) Reverse Loop had 17755 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149208, nTrgMulti = 14634, MnTrgMultiHits = 2.21327 nSrc121 = 89812, nSrcLost = 0, nSrcMulti = 39959, MnSrcMultiHits = 2.29698 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 14:40:25 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (153201) Reverse Loop had 27740 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141217, nTrgMulti = 22625, MnTrgMultiHits = 2.22608 nSrc121 = 121047, nSrcLost = 0, nSrcMulti = 32154, MnSrcMultiHits = 2.19366 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 14:40:36 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (151122) Reverse Loop had 26917 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141783, nTrgMulti = 22059, MnTrgMultiHits = 2.22023 nSrc121 = 118187, nSrcLost = 0, nSrcMulti = 32935, MnSrcMultiHits = 2.20349 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 14:40:47 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128812) Reverse Loop had 17045 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 14:40:57 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (126683) Reverse Loop had 15877 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 150548, nTrgMulti = 13294, MnTrgMultiHits = 2.1943 nSrc121 = 85734, nSrcLost = 0, nSrcMulti = 40949, MnSrcMultiHits = 2.29517 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 14:41:07 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/lh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (130856) Reverse Loop had 18369 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148807, nTrgMulti = 15035, MnTrgMultiHits = 2.22175 nSrc121 = 91115, nSrcLost = 0, nSrcMulti = 39741, MnSrcMultiHits = 2.29224 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.lh.thickness.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.lh.thickness.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.3743 Wed Jul 3 14:41:18 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.thickness.mgh --mean --o /REMOVED_DIR/avg_elder/surf/lh.thickness.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/lh.thickness.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.thickness.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.lh.thickness.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.lh.thickness.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.thickness.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.thickness --trg_type curv --hemi lh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.thickness.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.thickness --trg_type curv --hemi lh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/lh.thickness.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/lh.thickness trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.area.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas area --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.area.log nsubjects = 25 INFO: turning on jacobican correction tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.area.log Wed Jul 3 14:41:22 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.area.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas area --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.area.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 14:41:22 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128933) Reverse Loop had 18735 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 148497, nTrgMulti = 15345, MnTrgMultiHits = 2.22092 nSrc121 = 88894, nSrcLost = 0, nSrcMulti = 40039, MnSrcMultiHits = 2.33979 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 14:41:35 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (140878) Reverse Loop had 22726 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 145305, nTrgMulti = 18537, MnTrgMultiHits = 2.22598 nSrc121 = 104147, nSrcLost = 0, nSrcMulti = 36731, MnSrcMultiHits = 2.24391 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 14:41:49 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (135469) Reverse Loop had 19862 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147429, nTrgMulti = 16413, MnTrgMultiHits = 2.21014 nSrc121 = 97306, nSrcLost = 0, nSrcMulti = 38163, MnSrcMultiHits = 2.26392 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 14:42:03 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (146422) Reverse Loop had 25322 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143298, nTrgMulti = 20544, MnTrgMultiHits = 2.23257 nSrc121 = 111968, nSrcLost = 0, nSrcMulti = 34454, MnSrcMultiHits = 2.24055 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 14:42:18 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (138060) Reverse Loop had 21893 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146063, nTrgMulti = 17779, MnTrgMultiHits = 2.2314 nSrc121 = 100252, nSrcLost = 0, nSrcMulti = 37808, MnSrcMultiHits = 2.26098 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 14:42:32 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (145510) Reverse Loop had 25458 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143491, nTrgMulti = 20351, MnTrgMultiHits = 2.25095 nSrc121 = 109992, nSrcLost = 0, nSrcMulti = 35518, MnSrcMultiHits = 2.2329 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 14:42:47 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128812) Reverse Loop had 17045 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 14:43:00 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (122735) Reverse Loop had 15510 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151209, nTrgMulti = 12633, MnTrgMultiHits = 2.22774 nSrc121 = 80131, nSrcLost = 0, nSrcMulti = 42604, MnSrcMultiHits = 2.32891 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 14:43:14 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (141926) Reverse Loop had 23922 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 144316, nTrgMulti = 19526, MnTrgMultiHits = 2.22514 nSrc121 = 105468, nSrcLost = 0, nSrcMulti = 36458, MnSrcMultiHits = 2.25728 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 14:43:28 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (158641) Reverse Loop had 33341 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 137465, nTrgMulti = 26377, MnTrgMultiHits = 2.26402 nSrc121 = 126898, nSrcLost = 0, nSrcMulti = 31743, MnSrcMultiHits = 2.21419 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 14:43:45 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (146202) Reverse Loop had 25261 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143504, nTrgMulti = 20338, MnTrgMultiHits = 2.24206 nSrc121 = 110955, nSrcLost = 0, nSrcMulti = 35247, MnSrcMultiHits = 2.21715 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 14:44:00 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (132739) Reverse Loop had 19068 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 148490, nTrgMulti = 15352, MnTrgMultiHits = 2.24205 nSrc121 = 93303, nSrcLost = 0, nSrcMulti = 39436, MnSrcMultiHits = 2.27221 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 14:44:13 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (127311) Reverse Loop had 16485 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 150338, nTrgMulti = 13504, MnTrgMultiHits = 2.22075 nSrc121 = 86482, nSrcLost = 0, nSrcMulti = 40829, MnSrcMultiHits = 2.29849 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 14:44:26 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (142631) Reverse Loop had 23826 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 144814, nTrgMulti = 19028, MnTrgMultiHits = 2.25215 nSrc121 = 105987, nSrcLost = 0, nSrcMulti = 36644, MnSrcMultiHits = 2.22904 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 14:44:41 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (122920) Reverse Loop had 14824 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151677, nTrgMulti = 12165, MnTrgMultiHits = 2.21858 nSrc121 = 80471, nSrcLost = 0, nSrcMulti = 42449, MnSrcMultiHits = 2.31325 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 14:44:53 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (134786) Reverse Loop had 19462 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147830, nTrgMulti = 16012, MnTrgMultiHits = 2.21546 nSrc121 = 96278, nSrcLost = 0, nSrcMulti = 38508, MnSrcMultiHits = 2.25995 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 14:45:06 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (133340) Reverse Loop had 20786 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147017, nTrgMulti = 16825, MnTrgMultiHits = 2.23542 nSrc121 = 94321, nSrcLost = 0, nSrcMulti = 39019, MnSrcMultiHits = 2.31444 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 14:45:20 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (135754) Reverse Loop had 20917 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146789, nTrgMulti = 17053, MnTrgMultiHits = 2.22659 nSrc121 = 97362, nSrcLost = 0, nSrcMulti = 38392, MnSrcMultiHits = 2.27644 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 14:45:34 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (150237) Reverse Loop had 27542 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141740, nTrgMulti = 22102, MnTrgMultiHits = 2.24613 nSrc121 = 116615, nSrcLost = 0, nSrcMulti = 33622, MnSrcMultiHits = 2.22381 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 14:45:49 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (129771) Reverse Loop had 17755 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149208, nTrgMulti = 14634, MnTrgMultiHits = 2.21327 nSrc121 = 89812, nSrcLost = 0, nSrcMulti = 39959, MnSrcMultiHits = 2.29698 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 14:46:02 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (153201) Reverse Loop had 27740 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141217, nTrgMulti = 22625, MnTrgMultiHits = 2.22608 nSrc121 = 121047, nSrcLost = 0, nSrcMulti = 32154, MnSrcMultiHits = 2.19366 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 14:46:18 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (151122) Reverse Loop had 26917 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141783, nTrgMulti = 22059, MnTrgMultiHits = 2.22023 nSrc121 = 118187, nSrcLost = 0, nSrcMulti = 32935, MnSrcMultiHits = 2.20349 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 14:46:34 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128812) Reverse Loop had 17045 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 14:46:47 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (126683) Reverse Loop had 15877 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 150548, nTrgMulti = 13294, MnTrgMultiHits = 2.1943 nSrc121 = 85734, nSrcLost = 0, nSrcMulti = 40949, MnSrcMultiHits = 2.29517 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 14:47:00 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/lh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (130856) Reverse Loop had 18369 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 148807, nTrgMulti = 15035, MnTrgMultiHits = 2.22175 nSrc121 = 91115, nSrcLost = 0, nSrcMulti = 39741, MnSrcMultiHits = 2.29224 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.lh.area.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.lh.area.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.5740 Wed Jul 3 14:47:15 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.area.mgh --mean --o /REMOVED_DIR/avg_elder/surf/lh.white.avg.area.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/lh.white.avg.area.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.area.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.lh.area.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.lh.area.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.white.avg.area.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.area --trg_type curv --hemi lh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.white.avg.area.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.area --trg_type curv --hemi lh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/lh.white.avg.area.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/lh.area trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.volume.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas volume --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.volume.log nsubjects = 25 INFO: turning on jacobican correction tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.volume.log Wed Jul 3 14:47:19 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.volume.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas volume --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.volume.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 14:47:19 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128933) Reverse Loop had 18735 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 148497, nTrgMulti = 15345, MnTrgMultiHits = 2.22092 nSrc121 = 88894, nSrcLost = 0, nSrcMulti = 40039, MnSrcMultiHits = 2.33979 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 14:47:32 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (140878) Reverse Loop had 22726 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 145305, nTrgMulti = 18537, MnTrgMultiHits = 2.22598 nSrc121 = 104147, nSrcLost = 0, nSrcMulti = 36731, MnSrcMultiHits = 2.24391 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 14:47:46 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (135469) Reverse Loop had 19862 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147429, nTrgMulti = 16413, MnTrgMultiHits = 2.21014 nSrc121 = 97306, nSrcLost = 0, nSrcMulti = 38163, MnSrcMultiHits = 2.26392 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 14:48:00 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (146422) Reverse Loop had 25322 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143298, nTrgMulti = 20544, MnTrgMultiHits = 2.23257 nSrc121 = 111968, nSrcLost = 0, nSrcMulti = 34454, MnSrcMultiHits = 2.24055 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 14:48:14 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (138060) Reverse Loop had 21893 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146063, nTrgMulti = 17779, MnTrgMultiHits = 2.2314 nSrc121 = 100252, nSrcLost = 0, nSrcMulti = 37808, MnSrcMultiHits = 2.26098 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 14:48:28 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (145510) Reverse Loop had 25458 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143491, nTrgMulti = 20351, MnTrgMultiHits = 2.25095 nSrc121 = 109992, nSrcLost = 0, nSrcMulti = 35518, MnSrcMultiHits = 2.2329 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 14:48:43 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128812) Reverse Loop had 17045 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 14:48:56 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (122735) Reverse Loop had 15510 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151209, nTrgMulti = 12633, MnTrgMultiHits = 2.22774 nSrc121 = 80131, nSrcLost = 0, nSrcMulti = 42604, MnSrcMultiHits = 2.32891 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 14:49:09 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (141926) Reverse Loop had 23922 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 144316, nTrgMulti = 19526, MnTrgMultiHits = 2.22514 nSrc121 = 105468, nSrcLost = 0, nSrcMulti = 36458, MnSrcMultiHits = 2.25728 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 14:49:23 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (158641) Reverse Loop had 33341 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 137465, nTrgMulti = 26377, MnTrgMultiHits = 2.26402 nSrc121 = 126898, nSrcLost = 0, nSrcMulti = 31743, MnSrcMultiHits = 2.21419 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 14:49:40 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (146202) Reverse Loop had 25261 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143504, nTrgMulti = 20338, MnTrgMultiHits = 2.24206 nSrc121 = 110955, nSrcLost = 0, nSrcMulti = 35247, MnSrcMultiHits = 2.21715 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 14:49:55 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (132739) Reverse Loop had 19068 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 148490, nTrgMulti = 15352, MnTrgMultiHits = 2.24205 nSrc121 = 93303, nSrcLost = 0, nSrcMulti = 39436, MnSrcMultiHits = 2.27221 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 14:50:08 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (127311) Reverse Loop had 16485 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 150338, nTrgMulti = 13504, MnTrgMultiHits = 2.22075 nSrc121 = 86482, nSrcLost = 0, nSrcMulti = 40829, MnSrcMultiHits = 2.29849 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 14:50:21 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (142631) Reverse Loop had 23826 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 144814, nTrgMulti = 19028, MnTrgMultiHits = 2.25215 nSrc121 = 105987, nSrcLost = 0, nSrcMulti = 36644, MnSrcMultiHits = 2.22904 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 14:50:35 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (122920) Reverse Loop had 14824 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151677, nTrgMulti = 12165, MnTrgMultiHits = 2.21858 nSrc121 = 80471, nSrcLost = 0, nSrcMulti = 42449, MnSrcMultiHits = 2.31325 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 14:50:47 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (134786) Reverse Loop had 19462 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147830, nTrgMulti = 16012, MnTrgMultiHits = 2.21546 nSrc121 = 96278, nSrcLost = 0, nSrcMulti = 38508, MnSrcMultiHits = 2.25995 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 14:51:02 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (133340) Reverse Loop had 20786 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147017, nTrgMulti = 16825, MnTrgMultiHits = 2.23542 nSrc121 = 94321, nSrcLost = 0, nSrcMulti = 39019, MnSrcMultiHits = 2.31444 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 14:51:16 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (135754) Reverse Loop had 20917 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146789, nTrgMulti = 17053, MnTrgMultiHits = 2.22659 nSrc121 = 97362, nSrcLost = 0, nSrcMulti = 38392, MnSrcMultiHits = 2.27644 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 14:51:29 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (150237) Reverse Loop had 27542 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141740, nTrgMulti = 22102, MnTrgMultiHits = 2.24613 nSrc121 = 116615, nSrcLost = 0, nSrcMulti = 33622, MnSrcMultiHits = 2.22381 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 14:51:44 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (129771) Reverse Loop had 17755 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149208, nTrgMulti = 14634, MnTrgMultiHits = 2.21327 nSrc121 = 89812, nSrcLost = 0, nSrcMulti = 39959, MnSrcMultiHits = 2.29698 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 14:51:57 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (153201) Reverse Loop had 27740 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141217, nTrgMulti = 22625, MnTrgMultiHits = 2.22608 nSrc121 = 121047, nSrcLost = 0, nSrcMulti = 32154, MnSrcMultiHits = 2.19366 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 14:52:12 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (151122) Reverse Loop had 26917 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141783, nTrgMulti = 22059, MnTrgMultiHits = 2.22023 nSrc121 = 118187, nSrcLost = 0, nSrcMulti = 32935, MnSrcMultiHits = 2.20349 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 14:52:27 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128812) Reverse Loop had 17045 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 14:52:40 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (126683) Reverse Loop had 15877 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 150548, nTrgMulti = 13294, MnTrgMultiHits = 2.1943 nSrc121 = 85734, nSrcLost = 0, nSrcMulti = 40949, MnSrcMultiHits = 2.29517 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 14:52:54 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/lh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (130856) Reverse Loop had 18369 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 148807, nTrgMulti = 15035, MnTrgMultiHits = 2.22175 nSrc121 = 91115, nSrcLost = 0, nSrcMulti = 39741, MnSrcMultiHits = 2.29224 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.lh.volume.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.lh.volume.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.8031 Wed Jul 3 14:53:08 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.volume.mgh --mean --o /REMOVED_DIR/avg_elder/surf/lh.volume.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/lh.volume.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.volume.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.lh.volume.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.lh.volume.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.volume.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.volume --trg_type curv --hemi lh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.volume.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.volume --trg_type curv --hemi lh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/lh.volume.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/lh.volume trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.inflated.H.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas inflated.H --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.inflated.H.log nsubjects = 25 tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.inflated.H.log Wed Jul 3 14:53:12 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.lh.inflated.H.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi lh --meas inflated.H --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.lh.inflated.H.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 14:53:12 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0001.1.mgh --sval /REMOVED_DIR/0001/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128933) Reverse Loop had 18735 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148497, nTrgMulti = 15345, MnTrgMultiHits = 2.22092 nSrc121 = 88894, nSrcLost = 0, nSrcMulti = 40039, MnSrcMultiHits = 2.33979 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 14:53:22 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0002.2.mgh --sval /REMOVED_DIR/0002/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (140878) Reverse Loop had 22726 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145305, nTrgMulti = 18537, MnTrgMultiHits = 2.22598 nSrc121 = 104147, nSrcLost = 0, nSrcMulti = 36731, MnSrcMultiHits = 2.24391 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 14:53:32 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0003.3.mgh --sval /REMOVED_DIR/0003/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135469) Reverse Loop had 19862 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147429, nTrgMulti = 16413, MnTrgMultiHits = 2.21014 nSrc121 = 97306, nSrcLost = 0, nSrcMulti = 38163, MnSrcMultiHits = 2.26392 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 14:53:41 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0004.4.mgh --sval /REMOVED_DIR/0004/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146422) Reverse Loop had 25322 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143298, nTrgMulti = 20544, MnTrgMultiHits = 2.23257 nSrc121 = 111968, nSrcLost = 0, nSrcMulti = 34454, MnSrcMultiHits = 2.24055 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 14:53:52 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0005.5.mgh --sval /REMOVED_DIR/0005/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (138060) Reverse Loop had 21893 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146063, nTrgMulti = 17779, MnTrgMultiHits = 2.2314 nSrc121 = 100252, nSrcLost = 0, nSrcMulti = 37808, MnSrcMultiHits = 2.26098 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 14:54:02 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0006.6.mgh --sval /REMOVED_DIR/0006/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (145510) Reverse Loop had 25458 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143491, nTrgMulti = 20351, MnTrgMultiHits = 2.25095 nSrc121 = 109992, nSrcLost = 0, nSrcMulti = 35518, MnSrcMultiHits = 2.2329 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 14:54:13 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.7.mgh --sval /REMOVED_DIR/0023/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128812) Reverse Loop had 17045 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 14:54:22 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0008.8.mgh --sval /REMOVED_DIR/0008/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122735) Reverse Loop had 15510 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151209, nTrgMulti = 12633, MnTrgMultiHits = 2.22774 nSrc121 = 80131, nSrcLost = 0, nSrcMulti = 42604, MnSrcMultiHits = 2.32891 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 14:54:32 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0009.9.mgh --sval /REMOVED_DIR/0009/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141926) Reverse Loop had 23922 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144316, nTrgMulti = 19526, MnTrgMultiHits = 2.22514 nSrc121 = 105468, nSrcLost = 0, nSrcMulti = 36458, MnSrcMultiHits = 2.25728 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 14:54:42 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0010.10.mgh --sval /REMOVED_DIR/0010/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (158641) Reverse Loop had 33341 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 137465, nTrgMulti = 26377, MnTrgMultiHits = 2.26402 nSrc121 = 126898, nSrcLost = 0, nSrcMulti = 31743, MnSrcMultiHits = 2.21419 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 14:54:54 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0011.11.mgh --sval /REMOVED_DIR/0011/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146202) Reverse Loop had 25261 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143504, nTrgMulti = 20338, MnTrgMultiHits = 2.24206 nSrc121 = 110955, nSrcLost = 0, nSrcMulti = 35247, MnSrcMultiHits = 2.21715 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 14:55:05 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0012.12.mgh --sval /REMOVED_DIR/0012/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (132739) Reverse Loop had 19068 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148490, nTrgMulti = 15352, MnTrgMultiHits = 2.24205 nSrc121 = 93303, nSrcLost = 0, nSrcMulti = 39436, MnSrcMultiHits = 2.27221 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 14:55:16 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0013.13.mgh --sval /REMOVED_DIR/0013/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (127311) Reverse Loop had 16485 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 150338, nTrgMulti = 13504, MnTrgMultiHits = 2.22075 nSrc121 = 86482, nSrcLost = 0, nSrcMulti = 40829, MnSrcMultiHits = 2.29849 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 14:55:25 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0014.14.mgh --sval /REMOVED_DIR/0014/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (142631) Reverse Loop had 23826 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144814, nTrgMulti = 19028, MnTrgMultiHits = 2.25215 nSrc121 = 105987, nSrcLost = 0, nSrcMulti = 36644, MnSrcMultiHits = 2.22904 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 14:55:35 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0015.15.mgh --sval /REMOVED_DIR/0015/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122920) Reverse Loop had 14824 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151677, nTrgMulti = 12165, MnTrgMultiHits = 2.21858 nSrc121 = 80471, nSrcLost = 0, nSrcMulti = 42449, MnSrcMultiHits = 2.31325 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 14:55:45 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0016.16.mgh --sval /REMOVED_DIR/0016/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134786) Reverse Loop had 19462 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147830, nTrgMulti = 16012, MnTrgMultiHits = 2.21546 nSrc121 = 96278, nSrcLost = 0, nSrcMulti = 38508, MnSrcMultiHits = 2.25995 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 14:55:54 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0017.17.mgh --sval /REMOVED_DIR/0017/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (133340) Reverse Loop had 20786 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147017, nTrgMulti = 16825, MnTrgMultiHits = 2.23542 nSrc121 = 94321, nSrcLost = 0, nSrcMulti = 39019, MnSrcMultiHits = 2.31444 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 14:56:05 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0018.18.mgh --sval /REMOVED_DIR/0018/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135754) Reverse Loop had 20917 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146789, nTrgMulti = 17053, MnTrgMultiHits = 2.22659 nSrc121 = 97362, nSrcLost = 0, nSrcMulti = 38392, MnSrcMultiHits = 2.27644 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 14:56:15 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0019.19.mgh --sval /REMOVED_DIR/0019/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (150237) Reverse Loop had 27542 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141740, nTrgMulti = 22102, MnTrgMultiHits = 2.24613 nSrc121 = 116615, nSrcLost = 0, nSrcMulti = 33622, MnSrcMultiHits = 2.22381 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 14:56:26 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0020.20.mgh --sval /REMOVED_DIR/0020/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (129771) Reverse Loop had 17755 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149208, nTrgMulti = 14634, MnTrgMultiHits = 2.21327 nSrc121 = 89812, nSrcLost = 0, nSrcMulti = 39959, MnSrcMultiHits = 2.29698 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 14:56:35 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0021.21.mgh --sval /REMOVED_DIR/0021/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (153201) Reverse Loop had 27740 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141217, nTrgMulti = 22625, MnTrgMultiHits = 2.22608 nSrc121 = 121047, nSrcLost = 0, nSrcMulti = 32154, MnSrcMultiHits = 2.19366 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 14:56:47 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0022.22.mgh --sval /REMOVED_DIR/0022/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (151122) Reverse Loop had 26917 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141783, nTrgMulti = 22059, MnTrgMultiHits = 2.22023 nSrc121 = 118187, nSrcLost = 0, nSrcMulti = 32935, MnSrcMultiHits = 2.20349 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 14:56:58 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.23.mgh --sval /REMOVED_DIR/0023/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128812) Reverse Loop had 17045 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149926, nTrgMulti = 13916, MnTrgMultiHits = 2.22485 nSrc121 = 87739, nSrcLost = 0, nSrcMulti = 41073, MnSrcMultiHits = 2.26786 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 14:57:07 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0024.24.mgh --sval /REMOVED_DIR/0024/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (126683) Reverse Loop had 15877 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 150548, nTrgMulti = 13294, MnTrgMultiHits = 2.1943 nSrc121 = 85734, nSrcLost = 0, nSrcMulti = 40949, MnSrcMultiHits = 2.29517 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 14:57:17 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi lh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi lh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0025.25.mgh --sval /REMOVED_DIR/0025/surf/lh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/lh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/lh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/lh.inflated.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (130856) Reverse Loop had 18369 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148807, nTrgMulti = 15035, MnTrgMultiHits = 2.22175 nSrc121 = 91115, nSrcLost = 0, nSrcMulti = 39741, MnSrcMultiHits = 2.29224 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.lh.inflated.H.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.lh.inflated.H.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.10511 Wed Jul 3 14:57:27 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.inflated.H.mgh --mean --o /REMOVED_DIR/avg_elder/surf/lh.inflated.H.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/lh.inflated.H.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.lh.inflated.H.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.lh.inflated.H.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.lh.inflated.H.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.inflated.H.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.inflated.H --trg_type curv --hemi lh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/lh.inflated.H.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/lh.inflated.H --trg_type curv --hemi lh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/lh.inflated.H.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/lh.inflated.H trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/lh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data #@# Making average rh.white surface --------------------- Wed Jul 3 14:57:31 CEST 2019 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mris_make_average_surface -i 7 -o white -sdir-out /REMOVED_DIR rh white sphere.reg avg_elder 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 reading vertex positions from white... --------------------------------------------------- hemi = rh avg_surf_name = white canon_surf_name = sphere.reg out_sname = avg_elder xform = talairach.xfm --------------------------------------------------- --------------------------------------------------- #@# processing subject 1/25 0001... Reading /REMOVED_DIR/0001/surf/rh.sphere.reg Read /REMOVED_DIR/0001/mri/T1.mgz Surface area: 890.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 2/25 0002... Reading /REMOVED_DIR/0002/surf/rh.sphere.reg Read /REMOVED_DIR/0002/mri/T1.mgz Surface area: 965.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 3/25 0003... Reading /REMOVED_DIR/0003/surf/rh.sphere.reg Read /REMOVED_DIR/0003/mri/T1.mgz Surface area: 908.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 4/25 0004... Reading /REMOVED_DIR/0004/surf/rh.sphere.reg Read /REMOVED_DIR/0004/mri/T1.mgz Surface area: 995.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 5/25 0005... Reading /REMOVED_DIR/0005/surf/rh.sphere.reg Read /REMOVED_DIR/0005/mri/T1.mgz Surface area: 948.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 6/25 0006... Reading /REMOVED_DIR/0006/surf/rh.sphere.reg Read /REMOVED_DIR/0006/mri/T1.mgz Surface area: 1005.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 7/25 0023... Reading /REMOVED_DIR/0023/surf/rh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 869.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 8/25 0008... Reading /REMOVED_DIR/0008/surf/rh.sphere.reg Read /REMOVED_DIR/0008/mri/T1.mgz Surface area: 856.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 9/25 0009... Reading /REMOVED_DIR/0009/surf/rh.sphere.reg Read /REMOVED_DIR/0009/mri/T1.mgz Surface area: 960.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 10/25 0010... Reading /REMOVED_DIR/0010/surf/rh.sphere.reg Read /REMOVED_DIR/0010/mri/T1.mgz Surface area: 1085.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 11/25 0011... Reading /REMOVED_DIR/0011/surf/rh.sphere.reg Read /REMOVED_DIR/0011/mri/T1.mgz Surface area: 983.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 12/25 0012... Reading /REMOVED_DIR/0012/surf/rh.sphere.reg Read /REMOVED_DIR/0012/mri/T1.mgz Surface area: 917.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 13/25 0013... Reading /REMOVED_DIR/0013/surf/rh.sphere.reg Read /REMOVED_DIR/0013/mri/T1.mgz Surface area: 858.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 14/25 0014... Reading /REMOVED_DIR/0014/surf/rh.sphere.reg Read /REMOVED_DIR/0014/mri/T1.mgz Surface area: 970.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 15/25 0015... Reading /REMOVED_DIR/0015/surf/rh.sphere.reg Read /REMOVED_DIR/0015/mri/T1.mgz Surface area: 838.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 16/25 0016... Reading /REMOVED_DIR/0016/surf/rh.sphere.reg Read /REMOVED_DIR/0016/mri/T1.mgz Surface area: 911.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 17/25 0017... Reading /REMOVED_DIR/0017/surf/rh.sphere.reg Read /REMOVED_DIR/0017/mri/T1.mgz Surface area: 901.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 18/25 0018... Reading /REMOVED_DIR/0018/surf/rh.sphere.reg Read /REMOVED_DIR/0018/mri/T1.mgz Surface area: 928.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 19/25 0019... Reading /REMOVED_DIR/0019/surf/rh.sphere.reg Read /REMOVED_DIR/0019/mri/T1.mgz Surface area: 1018.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 20/25 0020... Reading /REMOVED_DIR/0020/surf/rh.sphere.reg Read /REMOVED_DIR/0020/mri/T1.mgz Surface area: 874.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 21/25 0021... Reading /REMOVED_DIR/0021/surf/rh.sphere.reg Read /REMOVED_DIR/0021/mri/T1.mgz Surface area: 1042.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 22/25 0022... Reading /REMOVED_DIR/0022/surf/rh.sphere.reg Read /REMOVED_DIR/0022/mri/T1.mgz Surface area: 1015.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 23/25 0023... Reading /REMOVED_DIR/0023/surf/rh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 869.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 24/25 0024... Reading /REMOVED_DIR/0024/surf/rh.sphere.reg Read /REMOVED_DIR/0024/mri/T1.mgz Surface area: 856.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 25/25 0025... Reading /REMOVED_DIR/0025/surf/rh.sphere.reg Read /REMOVED_DIR/0025/mri/T1.mgz Surface area: 888.6 cm^2 Applying linear transform Finished loading all data Avg surf area = 934.358 cm Reading icosahedron from /usr/local/freesurfer/lib/bem/ic7.tri... setting group surface area to be 934.4 cm^2 (scale=1.14) Adding volume geometry from /usr/local/freesurfer/average/mni305.cor.mgz writing average white surface to /REMOVED_DIR/avg_elder/surf/rh.white writing group avg surface area 934 cm^2 into surface file mris_make_average_surface done #@# Making average rh.pial surface --------------------- Wed Jul 3 14:59:11 CEST 2019 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mris_make_average_surface -i 7 -o pial -sdir-out /REMOVED_DIR rh pial sphere.reg avg_elder 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 reading vertex positions from pial... --------------------------------------------------- hemi = rh avg_surf_name = pial canon_surf_name = sphere.reg out_sname = avg_elder xform = talairach.xfm --------------------------------------------------- --------------------------------------------------- #@# processing subject 1/25 0001... Reading /REMOVED_DIR/0001/surf/rh.sphere.reg Read /REMOVED_DIR/0001/mri/T1.mgz Surface area: 1051.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 2/25 0002... Reading /REMOVED_DIR/0002/surf/rh.sphere.reg Read /REMOVED_DIR/0002/mri/T1.mgz Surface area: 1140.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 3/25 0003... Reading /REMOVED_DIR/0003/surf/rh.sphere.reg Read /REMOVED_DIR/0003/mri/T1.mgz Surface area: 1081.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 4/25 0004... Reading /REMOVED_DIR/0004/surf/rh.sphere.reg Read /REMOVED_DIR/0004/mri/T1.mgz Surface area: 1191.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 5/25 0005... Reading /REMOVED_DIR/0005/surf/rh.sphere.reg Read /REMOVED_DIR/0005/mri/T1.mgz Surface area: 1105.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 6/25 0006... Reading /REMOVED_DIR/0006/surf/rh.sphere.reg Read /REMOVED_DIR/0006/mri/T1.mgz Surface area: 1194.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 7/25 0023... Reading /REMOVED_DIR/0023/surf/rh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 1061.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 8/25 0008... Reading /REMOVED_DIR/0008/surf/rh.sphere.reg Read /REMOVED_DIR/0008/mri/T1.mgz Surface area: 1024.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 9/25 0009... Reading /REMOVED_DIR/0009/surf/rh.sphere.reg Read /REMOVED_DIR/0009/mri/T1.mgz Surface area: 1156.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 10/25 0010... Reading /REMOVED_DIR/0010/surf/rh.sphere.reg Read /REMOVED_DIR/0010/mri/T1.mgz Surface area: 1283.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 11/25 0011... Reading /REMOVED_DIR/0011/surf/rh.sphere.reg Read /REMOVED_DIR/0011/mri/T1.mgz Surface area: 1165.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 12/25 0012... Reading /REMOVED_DIR/0012/surf/rh.sphere.reg Read /REMOVED_DIR/0012/mri/T1.mgz Surface area: 1094.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 13/25 0013... Reading /REMOVED_DIR/0013/surf/rh.sphere.reg Read /REMOVED_DIR/0013/mri/T1.mgz Surface area: 1023.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 14/25 0014... Reading /REMOVED_DIR/0014/surf/rh.sphere.reg Read /REMOVED_DIR/0014/mri/T1.mgz Surface area: 1175.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 15/25 0015... Reading /REMOVED_DIR/0015/surf/rh.sphere.reg Read /REMOVED_DIR/0015/mri/T1.mgz Surface area: 999.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 16/25 0016... Reading /REMOVED_DIR/0016/surf/rh.sphere.reg Read /REMOVED_DIR/0016/mri/T1.mgz Surface area: 1070.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 17/25 0017... Reading /REMOVED_DIR/0017/surf/rh.sphere.reg Read /REMOVED_DIR/0017/mri/T1.mgz Surface area: 1074.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 18/25 0018... Reading /REMOVED_DIR/0018/surf/rh.sphere.reg Read /REMOVED_DIR/0018/mri/T1.mgz Surface area: 1119.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 19/25 0019... Reading /REMOVED_DIR/0019/surf/rh.sphere.reg Read /REMOVED_DIR/0019/mri/T1.mgz Surface area: 1222.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 20/25 0020... Reading /REMOVED_DIR/0020/surf/rh.sphere.reg Read /REMOVED_DIR/0020/mri/T1.mgz Surface area: 1041.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 21/25 0021... Reading /REMOVED_DIR/0021/surf/rh.sphere.reg Read /REMOVED_DIR/0021/mri/T1.mgz Surface area: 1220.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 22/25 0022... Reading /REMOVED_DIR/0022/surf/rh.sphere.reg Read /REMOVED_DIR/0022/mri/T1.mgz Surface area: 1202.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 23/25 0023... Reading /REMOVED_DIR/0023/surf/rh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 1061.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 24/25 0024... Reading /REMOVED_DIR/0024/surf/rh.sphere.reg Read /REMOVED_DIR/0024/mri/T1.mgz Surface area: 1024.5 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 25/25 0025... Reading /REMOVED_DIR/0025/surf/rh.sphere.reg Read /REMOVED_DIR/0025/mri/T1.mgz Surface area: 1069.0 cm^2 Applying linear transform Finished loading all data Avg surf area = 1114.23 cm Reading icosahedron from /usr/local/freesurfer/lib/bem/ic7.tri... setting group surface area to be 1114.2 cm^2 (scale=1.18) Adding volume geometry from /usr/local/freesurfer/average/mni305.cor.mgz writing average pial surface to /REMOVED_DIR/avg_elder/surf/rh.pial writing group avg surface area 1114 cm^2 into surface file mris_make_average_surface done #@# Making average rh.orig surface --------------------- Wed Jul 3 15:00:51 CEST 2019 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mris_make_average_surface -i 7 -o orig -sdir-out /REMOVED_DIR rh orig sphere.reg avg_elder 0001 0002 0003 0004 0005 0006 0023 0008 0009 0010 0011 0012 0013 0014 0015 0016 0017 0018 0019 0020 0021 0022 0023 0024 0025 reading vertex positions from orig... --------------------------------------------------- hemi = rh avg_surf_name = orig canon_surf_name = sphere.reg out_sname = avg_elder xform = talairach.xfm --------------------------------------------------- --------------------------------------------------- #@# processing subject 1/25 0001... Reading /REMOVED_DIR/0001/surf/rh.sphere.reg Read /REMOVED_DIR/0001/mri/T1.mgz Surface area: 847.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 2/25 0002... Reading /REMOVED_DIR/0002/surf/rh.sphere.reg Read /REMOVED_DIR/0002/mri/T1.mgz Surface area: 903.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 3/25 0003... Reading /REMOVED_DIR/0003/surf/rh.sphere.reg Read /REMOVED_DIR/0003/mri/T1.mgz Surface area: 870.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 4/25 0004... Reading /REMOVED_DIR/0004/surf/rh.sphere.reg Read /REMOVED_DIR/0004/mri/T1.mgz Surface area: 950.0 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 5/25 0005... Reading /REMOVED_DIR/0005/surf/rh.sphere.reg Read /REMOVED_DIR/0005/mri/T1.mgz Surface area: 887.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 6/25 0006... Reading /REMOVED_DIR/0006/surf/rh.sphere.reg Read /REMOVED_DIR/0006/mri/T1.mgz Surface area: 941.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 7/25 0023... Reading /REMOVED_DIR/0023/surf/rh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 825.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 8/25 0008... Reading /REMOVED_DIR/0008/surf/rh.sphere.reg Read /REMOVED_DIR/0008/mri/T1.mgz Surface area: 790.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 9/25 0009... Reading /REMOVED_DIR/0009/surf/rh.sphere.reg Read /REMOVED_DIR/0009/mri/T1.mgz Surface area: 911.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 10/25 0010... Reading /REMOVED_DIR/0010/surf/rh.sphere.reg Read /REMOVED_DIR/0010/mri/T1.mgz Surface area: 1025.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 11/25 0011... Reading /REMOVED_DIR/0011/surf/rh.sphere.reg Read /REMOVED_DIR/0011/mri/T1.mgz Surface area: 941.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 12/25 0012... Reading /REMOVED_DIR/0012/surf/rh.sphere.reg Read /REMOVED_DIR/0012/mri/T1.mgz Surface area: 858.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 13/25 0013... Reading /REMOVED_DIR/0013/surf/rh.sphere.reg Read /REMOVED_DIR/0013/mri/T1.mgz Surface area: 819.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 14/25 0014... Reading /REMOVED_DIR/0014/surf/rh.sphere.reg Read /REMOVED_DIR/0014/mri/T1.mgz Surface area: 908.9 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 15/25 0015... Reading /REMOVED_DIR/0015/surf/rh.sphere.reg Read /REMOVED_DIR/0015/mri/T1.mgz Surface area: 775.1 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 16/25 0016... Reading /REMOVED_DIR/0016/surf/rh.sphere.reg Read /REMOVED_DIR/0016/mri/T1.mgz Surface area: 870.4 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 17/25 0017... Reading /REMOVED_DIR/0017/surf/rh.sphere.reg Read /REMOVED_DIR/0017/mri/T1.mgz Surface area: 858.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 18/25 0018... Reading /REMOVED_DIR/0018/surf/rh.sphere.reg Read /REMOVED_DIR/0018/mri/T1.mgz Surface area: 883.6 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 19/25 0019... Reading /REMOVED_DIR/0019/surf/rh.sphere.reg Read /REMOVED_DIR/0019/mri/T1.mgz Surface area: 954.8 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 20/25 0020... Reading /REMOVED_DIR/0020/surf/rh.sphere.reg Read /REMOVED_DIR/0020/mri/T1.mgz Surface area: 828.7 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 21/25 0021... Reading /REMOVED_DIR/0021/surf/rh.sphere.reg Read /REMOVED_DIR/0021/mri/T1.mgz Surface area: 995.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 22/25 0022... Reading /REMOVED_DIR/0022/surf/rh.sphere.reg Read /REMOVED_DIR/0022/mri/T1.mgz Surface area: 963.3 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 23/25 0023... Reading /REMOVED_DIR/0023/surf/rh.sphere.reg Read /REMOVED_DIR/0023/mri/T1.mgz Surface area: 825.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 24/25 0024... Reading /REMOVED_DIR/0024/surf/rh.sphere.reg Read /REMOVED_DIR/0024/mri/T1.mgz Surface area: 807.2 cm^2 Applying linear transform --------------------------------------------------- #@# processing subject 25/25 0025... Reading /REMOVED_DIR/0025/surf/rh.sphere.reg Read /REMOVED_DIR/0025/mri/T1.mgz Surface area: 836.1 cm^2 Applying linear transform Finished loading all data Avg surf area = 883.162 cm Reading icosahedron from /usr/local/freesurfer/lib/bem/ic7.tri... setting group surface area to be 883.2 cm^2 (scale=1.13) Adding volume geometry from /usr/local/freesurfer/average/mni305.cor.mgz writing average orig surface to /REMOVED_DIR/avg_elder/surf/rh.orig writing group avg surface area 883 cm^2 into surface file mris_make_average_surface done --------------------------------------------------- #@# Smoothing, inflating, etc rh ---------------- /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/surf mris_smooth -nw -n 5 ./rh.white ./rh.smoothwm writing group avg surface area 934 cm^2 into surface file mris_inflate -dist .01 -f .001 -no-save-sulc -n 15 ./rh.smoothwm ./rh.inflated Not saving sulc Reading ./rh.smoothwm step 000: RMS=0.082 (target=0.001) step 005: RMS=0.067 (target=0.001) step 010: RMS=0.052 (target=0.001) step 015: RMS=0.043 (target=0.001) step 020: RMS=0.037 (target=0.001) step 025: RMS=0.032 (target=0.001) step 030: RMS=0.028 (target=0.001) step 035: RMS=0.024 (target=0.001) step 040: RMS=0.022 (target=0.001) step 045: RMS=0.019 (target=0.001) step 050: RMS=0.018 (target=0.001) step 055: RMS=0.017 (target=0.001) step 060: RMS=0.016 (target=0.001) step 065: RMS=0.015 (target=0.001) step 070: RMS=0.014 (target=0.001) step 075: RMS=0.014 (target=0.001) step 080: RMS=0.013 (target=0.001) step 085: RMS=0.013 (target=0.001) step 090: RMS=0.012 (target=0.001) inflation complete. writing group avg surface area 934 cm^2 into surface file Not saving sulc mris_inflate utimesec 147.340000 mris_inflate stimesec 0.216000 mris_inflate ru_maxrss 203836 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 49418 mris_inflate ru_majflt 0 mris_inflate ru_nswap 0 mris_inflate ru_inblock 0 mris_inflate ru_oublock 11528 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 79 mris_inflate ru_nivcsw 233 annot2std --o label/rh.aparc.annot --rh --f /REMOVED_DIR/avg_elder/list.subjects.txt --t avg_elder --a aparc --srcsurfreg sphere.reg --trgsurfreg sphere.reg Wed Jul 3 15:05:07 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/annot2std --o label/rh.aparc.annot --rh --f /REMOVED_DIR/avg_elder/list.subjects.txt --t avg_elder --a aparc --srcsurfreg sphere.reg --trgsurfreg sphere.reg freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c $Id: annot2std,v 1.5 2016/06/13 18:00:34 greve Exp $ Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux #@# 1/25 0001 Wed Jul 3 15:05:07 CEST 2019 mri_annotation2label --subject 0001 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.ctab --annotation aparc --segbase 0 subject = 0001 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.mgh surface = white Reading surface /REMOVED_DIR/0001/surf/rh.white Loading annotations from /REMOVED_DIR/0001/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0001 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0001 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19457 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 73948, nSrcLost = 19457, nSrcMulti = 58634, MnSrcMultiHits = 1.53314 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.std.mgh #@# 2/25 0002 Wed Jul 3 15:05:18 CEST 2019 mri_annotation2label --subject 0002 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.ctab --annotation aparc --segbase 0 subject = 0002 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.mgh surface = white Reading surface /REMOVED_DIR/0002/surf/rh.white Loading annotations from /REMOVED_DIR/0002/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0002 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0002 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 22506 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 82443, nSrcLost = 22506, nSrcMulti = 58748, MnSrcMultiHits = 1.38556 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.std.mgh #@# 3/25 0003 Wed Jul 3 15:05:29 CEST 2019 mri_annotation2label --subject 0003 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.ctab --annotation aparc --segbase 0 subject = 0003 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.mgh surface = white Reading surface /REMOVED_DIR/0003/surf/rh.white Loading annotations from /REMOVED_DIR/0003/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0003 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0003 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19424 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 77364, nSrcLost = 19424, nSrcMulti = 57333, MnSrcMultiHits = 1.50835 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.std.mgh #@# 4/25 0004 Wed Jul 3 15:05:39 CEST 2019 mri_annotation2label --subject 0004 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.ctab --annotation aparc --segbase 0 subject = 0004 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.mgh surface = white Reading surface /REMOVED_DIR/0004/surf/rh.white Loading annotations from /REMOVED_DIR/0004/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0004 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0004 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 25270 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 88708, nSrcLost = 25270, nSrcMulti = 59363, MnSrcMultiHits = 1.26567 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.std.mgh #@# 5/25 0005 Wed Jul 3 15:05:51 CEST 2019 mri_annotation2label --subject 0005 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.ctab --annotation aparc --segbase 0 subject = 0005 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.mgh surface = white Reading surface /REMOVED_DIR/0005/surf/rh.white Loading annotations from /REMOVED_DIR/0005/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0005 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0005 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 22145 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 79807, nSrcLost = 22145, nSrcMulti = 59589, MnSrcMultiHits = 1.41024 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.std.mgh #@# 6/25 0006 Wed Jul 3 15:06:02 CEST 2019 mri_annotation2label --subject 0006 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.ctab --annotation aparc --segbase 0 subject = 0006 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.mgh surface = white Reading surface /REMOVED_DIR/0006/surf/rh.white Loading annotations from /REMOVED_DIR/0006/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0006 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0006 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 26518 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 85542, nSrcLost = 26518, nSrcMulti = 61412, MnSrcMultiHits = 1.275 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.std.mgh #@# 7/25 0023 Wed Jul 3 15:06:13 CEST 2019 mri_annotation2label --subject 0023 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.ctab --annotation aparc --segbase 0 subject = 0023 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.mgh surface = white Reading surface /REMOVED_DIR/0023/surf/rh.white Loading annotations from /REMOVED_DIR/0023/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17387 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70162, nSrcLost = 17387, nSrcMulti = 58425, MnSrcMultiHits = 1.60342 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.std.mgh #@# 8/25 0008 Wed Jul 3 15:06:24 CEST 2019 mri_annotation2label --subject 0008 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.ctab --annotation aparc --segbase 0 subject = 0008 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.mgh surface = white Reading surface /REMOVED_DIR/0008/surf/rh.white Loading annotations from /REMOVED_DIR/0008/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0008 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0008 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 15586 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 66351, nSrcLost = 15586, nSrcMulti = 57708, MnSrcMultiHits = 1.68938 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.std.mgh #@# 9/25 0009 Wed Jul 3 15:06:34 CEST 2019 mri_annotation2label --subject 0009 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.ctab --annotation aparc --segbase 0 subject = 0009 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.mgh surface = white Reading surface /REMOVED_DIR/0009/surf/rh.white Loading annotations from /REMOVED_DIR/0009/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0009 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0009 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 22978 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 82916, nSrcLost = 22978, nSrcMulti = 58959, MnSrcMultiHits = 1.37258 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.std.mgh #@# 10/25 0010 Wed Jul 3 15:06:45 CEST 2019 mri_annotation2label --subject 0010 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.ctab --annotation aparc --segbase 0 subject = 0010 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.mgh surface = white Reading surface /REMOVED_DIR/0010/surf/rh.white Loading annotations from /REMOVED_DIR/0010/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0010 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0010 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 33647 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 95874, nSrcLost = 33647, nSrcMulti = 64761, MnSrcMultiHits = 1.04952 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.std.mgh #@# 11/25 0011 Wed Jul 3 15:06:58 CEST 2019 mri_annotation2label --subject 0011 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.ctab --annotation aparc --segbase 0 subject = 0011 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.mgh surface = white Reading surface /REMOVED_DIR/0011/surf/rh.white Loading annotations from /REMOVED_DIR/0011/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0011 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0011 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 24896 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 86522, nSrcLost = 24896, nSrcMulti = 59868, MnSrcMultiHits = 1.29151 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.std.mgh #@# 12/25 0012 Wed Jul 3 15:07:09 CEST 2019 mri_annotation2label --subject 0012 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.ctab --annotation aparc --segbase 0 subject = 0012 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.mgh surface = white Reading surface /REMOVED_DIR/0012/surf/rh.white Loading annotations from /REMOVED_DIR/0012/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0012 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0012 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19955 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 75665, nSrcLost = 19955, nSrcMulti = 58812, MnSrcMultiHits = 1.4993 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.std.mgh #@# 13/25 0013 Wed Jul 3 15:07:20 CEST 2019 mri_annotation2label --subject 0013 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.ctab --annotation aparc --segbase 0 subject = 0013 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.mgh surface = white Reading surface /REMOVED_DIR/0013/surf/rh.white Loading annotations from /REMOVED_DIR/0013/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0013 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0013 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17121 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 69791, nSrcLost = 17121, nSrcMulti = 57860, MnSrcMultiHits = 1.62549 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.std.mgh #@# 14/25 0014 Wed Jul 3 15:07:31 CEST 2019 mri_annotation2label --subject 0014 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.ctab --annotation aparc --segbase 0 subject = 0014 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.mgh surface = white Reading surface /REMOVED_DIR/0014/surf/rh.white Loading annotations from /REMOVED_DIR/0014/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0014 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0014 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 23611 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 83145, nSrcLost = 23611, nSrcMulti = 59591, MnSrcMultiHits = 1.35418 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.std.mgh #@# 15/25 0015 Wed Jul 3 15:07:43 CEST 2019 mri_annotation2label --subject 0015 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.ctab --annotation aparc --segbase 0 subject = 0015 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.mgh surface = white Reading surface /REMOVED_DIR/0015/surf/rh.white Loading annotations from /REMOVED_DIR/0015/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0015 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0015 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 15585 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 64237, nSrcLost = 15585, nSrcMulti = 57898, MnSrcMultiHits = 1.72035 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.std.mgh #@# 16/25 0016 Wed Jul 3 15:07:53 CEST 2019 mri_annotation2label --subject 0016 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.ctab --annotation aparc --segbase 0 subject = 0016 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.mgh surface = white Reading surface /REMOVED_DIR/0016/surf/rh.white Loading annotations from /REMOVED_DIR/0016/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0016 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0016 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19280 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 77954, nSrcLost = 19280, nSrcMulti = 57501, MnSrcMultiHits = 1.49368 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.std.mgh #@# 17/25 0017 Wed Jul 3 15:08:03 CEST 2019 mri_annotation2label --subject 0017 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.ctab --annotation aparc --segbase 0 subject = 0017 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.mgh surface = white Reading surface /REMOVED_DIR/0017/surf/rh.white Loading annotations from /REMOVED_DIR/0017/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0017 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0017 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19569 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 75698, nSrcLost = 19569, nSrcMulti = 58381, MnSrcMultiHits = 1.50981 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.std.mgh #@# 18/25 0018 Wed Jul 3 15:08:14 CEST 2019 mri_annotation2label --subject 0018 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.ctab --annotation aparc --segbase 0 subject = 0018 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.mgh surface = white Reading surface /REMOVED_DIR/0018/surf/rh.white Loading annotations from /REMOVED_DIR/0018/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0018 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0018 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 21170 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 78725, nSrcLost = 21170, nSrcMulti = 59070, MnSrcMultiHits = 1.44095 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.std.mgh #@# 19/25 0019 Wed Jul 3 15:08:25 CEST 2019 mri_annotation2label --subject 0019 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.ctab --annotation aparc --segbase 0 subject = 0019 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.mgh surface = white Reading surface /REMOVED_DIR/0019/surf/rh.white Loading annotations from /REMOVED_DIR/0019/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0019 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0019 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 27283 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 88968, nSrcLost = 27283, nSrcMulti = 60993, MnSrcMultiHits = 1.22758 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.std.mgh #@# 20/25 0020 Wed Jul 3 15:08:37 CEST 2019 mri_annotation2label --subject 0020 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.ctab --annotation aparc --segbase 0 subject = 0020 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.mgh surface = white Reading surface /REMOVED_DIR/0020/surf/rh.white Loading annotations from /REMOVED_DIR/0020/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0020 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0020 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17757 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 71934, nSrcLost = 17757, nSrcMulti = 57572, MnSrcMultiHits = 1.5964 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.std.mgh #@# 21/25 0021 Wed Jul 3 15:08:48 CEST 2019 mri_annotation2label --subject 0021 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.ctab --annotation aparc --segbase 0 subject = 0021 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.mgh surface = white Reading surface /REMOVED_DIR/0021/surf/rh.white Loading annotations from /REMOVED_DIR/0021/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0021 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0021 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 29819 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 93279, nSrcLost = 29819, nSrcMulti = 61848, MnSrcMultiHits = 1.14091 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.std.mgh #@# 22/25 0022 Wed Jul 3 15:09:00 CEST 2019 mri_annotation2label --subject 0022 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.ctab --annotation aparc --segbase 0 subject = 0022 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.mgh surface = white Reading surface /REMOVED_DIR/0022/surf/rh.white Loading annotations from /REMOVED_DIR/0022/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0022 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0022 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 27767 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 90708, nSrcLost = 27767, nSrcMulti = 60636, MnSrcMultiHits = 1.20612 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.std.mgh #@# 23/25 0023 Wed Jul 3 15:09:12 CEST 2019 mri_annotation2label --subject 0023 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.ctab --annotation aparc --segbase 0 subject = 0023 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.mgh surface = white Reading surface /REMOVED_DIR/0023/surf/rh.white Loading annotations from /REMOVED_DIR/0023/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17387 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70162, nSrcLost = 17387, nSrcMulti = 58425, MnSrcMultiHits = 1.60342 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.std.mgh #@# 24/25 0024 Wed Jul 3 15:09:22 CEST 2019 mri_annotation2label --subject 0024 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.ctab --annotation aparc --segbase 0 subject = 0024 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.mgh surface = white Reading surface /REMOVED_DIR/0024/surf/rh.white Loading annotations from /REMOVED_DIR/0024/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0024 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0024 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 14870 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70107, nSrcLost = 14870, nSrcMulti = 55980, MnSrcMultiHits = 1.67444 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.std.mgh #@# 25/25 0025 Wed Jul 3 15:09:33 CEST 2019 mri_annotation2label --subject 0025 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.ctab --annotation aparc --segbase 0 subject = 0025 annotation = aparc hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.mgh surface = white Reading surface /REMOVED_DIR/0025/surf/rh.white Loading annotations from /REMOVED_DIR/0025/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0025 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0025 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 18301 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 73367, nSrcLost = 18301, nSrcMulti = 57973, MnSrcMultiHits = 1.56064 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.std.mgh mri_concat /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.2.0002.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.3.0003.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.4.0004.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.5.0005.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.6.0006.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.7.0023.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.8.0008.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.9.0009.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.10.0010.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.11.0011.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.12.0012.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.13.0013.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.14.0014.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.15.0015.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.16.0016.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.17.0017.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.18.0018.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.19.0019.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.20.0020.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.21.0021.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.22.0022.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.23.0023.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.24.0024.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.25.0025.std.mgh --vote --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.vote.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Voting MRIvote: sorting MRIvote: done sorting Writing to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.vote.mgh mri_convert --frame 1 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.vote.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.annot.p.mgh mri_convert.bin --frame 1 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.vote.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.annot.p.mgh $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.vote.mgh... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) keeping frame 1 writing to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.annot.p.mgh... mris_seg2annot --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.vote.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.ctab --s avg_elder --hemi rh --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.annot $Id: mris_seg2annot.c,v 1.10 2014/11/15 00:07:19 greve Exp $ cwd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder cmdline mris_seg2annot --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.vote.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.ctab --s avg_elder --hemi rh --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.annot sysname Linux hostname hyades02 machine x86_64 user mje subject avg_elder hemi rh surfseg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.vote.mgh ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.ctab annotfile /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.annot Reading surface seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.vote.mgh Reading surface /REMOVED_DIR/avg_elder/surf/rh.white Reading ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.15137/seg.1.0001.ctab Writing annot to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.annot Started at Wed Jul 3 15:05:07 CEST 2019 Ended at Wed Jul 3 15:09:47 CEST 2019 Annot2std-Run-Time-Sec 280 annot2std Done annot2std --o label/rh.aparc.a2009s.annot --rh --f /REMOVED_DIR/avg_elder/list.subjects.txt --t avg_elder --a aparc.a2009s --srcsurfreg sphere.reg --trgsurfreg sphere.reg Wed Jul 3 15:09:47 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/annot2std --o label/rh.aparc.a2009s.annot --rh --f /REMOVED_DIR/avg_elder/list.subjects.txt --t avg_elder --a aparc.a2009s --srcsurfreg sphere.reg --trgsurfreg sphere.reg freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c $Id: annot2std,v 1.5 2016/06/13 18:00:34 greve Exp $ Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux #@# 1/25 0001 Wed Jul 3 15:09:47 CEST 2019 mri_annotation2label --subject 0001 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.ctab --annotation aparc.a2009s --segbase 0 subject = 0001 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.mgh surface = white Reading surface /REMOVED_DIR/0001/surf/rh.white Loading annotations from /REMOVED_DIR/0001/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0001 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0001 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19457 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 73948, nSrcLost = 19457, nSrcMulti = 58634, MnSrcMultiHits = 1.53314 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.std.mgh #@# 2/25 0002 Wed Jul 3 15:09:58 CEST 2019 mri_annotation2label --subject 0002 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.ctab --annotation aparc.a2009s --segbase 0 subject = 0002 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.mgh surface = white Reading surface /REMOVED_DIR/0002/surf/rh.white Loading annotations from /REMOVED_DIR/0002/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0002 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0002 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 22506 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 82443, nSrcLost = 22506, nSrcMulti = 58748, MnSrcMultiHits = 1.38556 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.std.mgh #@# 3/25 0003 Wed Jul 3 15:10:09 CEST 2019 mri_annotation2label --subject 0003 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.ctab --annotation aparc.a2009s --segbase 0 subject = 0003 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.mgh surface = white Reading surface /REMOVED_DIR/0003/surf/rh.white Loading annotations from /REMOVED_DIR/0003/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0003 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0003 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19424 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 77364, nSrcLost = 19424, nSrcMulti = 57333, MnSrcMultiHits = 1.50835 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.std.mgh #@# 4/25 0004 Wed Jul 3 15:10:19 CEST 2019 mri_annotation2label --subject 0004 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.ctab --annotation aparc.a2009s --segbase 0 subject = 0004 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.mgh surface = white Reading surface /REMOVED_DIR/0004/surf/rh.white Loading annotations from /REMOVED_DIR/0004/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0004 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0004 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 25270 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 88708, nSrcLost = 25270, nSrcMulti = 59363, MnSrcMultiHits = 1.26567 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.std.mgh #@# 5/25 0005 Wed Jul 3 15:10:31 CEST 2019 mri_annotation2label --subject 0005 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.ctab --annotation aparc.a2009s --segbase 0 subject = 0005 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.mgh surface = white Reading surface /REMOVED_DIR/0005/surf/rh.white Loading annotations from /REMOVED_DIR/0005/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0005 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0005 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 22145 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 79807, nSrcLost = 22145, nSrcMulti = 59589, MnSrcMultiHits = 1.41024 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.std.mgh #@# 6/25 0006 Wed Jul 3 15:10:41 CEST 2019 mri_annotation2label --subject 0006 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.ctab --annotation aparc.a2009s --segbase 0 subject = 0006 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.mgh surface = white Reading surface /REMOVED_DIR/0006/surf/rh.white Loading annotations from /REMOVED_DIR/0006/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0006 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0006 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 26518 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 85542, nSrcLost = 26518, nSrcMulti = 61412, MnSrcMultiHits = 1.275 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.std.mgh #@# 7/25 0023 Wed Jul 3 15:10:53 CEST 2019 mri_annotation2label --subject 0023 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.ctab --annotation aparc.a2009s --segbase 0 subject = 0023 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.mgh surface = white Reading surface /REMOVED_DIR/0023/surf/rh.white Loading annotations from /REMOVED_DIR/0023/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17387 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70162, nSrcLost = 17387, nSrcMulti = 58425, MnSrcMultiHits = 1.60342 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.std.mgh #@# 8/25 0008 Wed Jul 3 15:11:04 CEST 2019 mri_annotation2label --subject 0008 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.ctab --annotation aparc.a2009s --segbase 0 subject = 0008 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.mgh surface = white Reading surface /REMOVED_DIR/0008/surf/rh.white Loading annotations from /REMOVED_DIR/0008/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0008 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0008 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 15586 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 66351, nSrcLost = 15586, nSrcMulti = 57708, MnSrcMultiHits = 1.68938 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.std.mgh #@# 9/25 0009 Wed Jul 3 15:11:14 CEST 2019 mri_annotation2label --subject 0009 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.ctab --annotation aparc.a2009s --segbase 0 subject = 0009 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.mgh surface = white Reading surface /REMOVED_DIR/0009/surf/rh.white Loading annotations from /REMOVED_DIR/0009/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0009 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0009 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 22978 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 82916, nSrcLost = 22978, nSrcMulti = 58959, MnSrcMultiHits = 1.37258 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.std.mgh #@# 10/25 0010 Wed Jul 3 15:11:26 CEST 2019 mri_annotation2label --subject 0010 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.ctab --annotation aparc.a2009s --segbase 0 subject = 0010 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.mgh surface = white Reading surface /REMOVED_DIR/0010/surf/rh.white Loading annotations from /REMOVED_DIR/0010/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0010 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0010 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 33647 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 95874, nSrcLost = 33647, nSrcMulti = 64761, MnSrcMultiHits = 1.04952 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.std.mgh #@# 11/25 0011 Wed Jul 3 15:11:39 CEST 2019 mri_annotation2label --subject 0011 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.ctab --annotation aparc.a2009s --segbase 0 subject = 0011 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.mgh surface = white Reading surface /REMOVED_DIR/0011/surf/rh.white Loading annotations from /REMOVED_DIR/0011/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0011 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0011 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 24896 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 86522, nSrcLost = 24896, nSrcMulti = 59868, MnSrcMultiHits = 1.29151 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.std.mgh #@# 12/25 0012 Wed Jul 3 15:11:50 CEST 2019 mri_annotation2label --subject 0012 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.ctab --annotation aparc.a2009s --segbase 0 subject = 0012 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.mgh surface = white Reading surface /REMOVED_DIR/0012/surf/rh.white Loading annotations from /REMOVED_DIR/0012/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0012 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0012 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19955 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 75665, nSrcLost = 19955, nSrcMulti = 58812, MnSrcMultiHits = 1.4993 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.std.mgh #@# 13/25 0013 Wed Jul 3 15:12:01 CEST 2019 mri_annotation2label --subject 0013 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.ctab --annotation aparc.a2009s --segbase 0 subject = 0013 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.mgh surface = white Reading surface /REMOVED_DIR/0013/surf/rh.white Loading annotations from /REMOVED_DIR/0013/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0013 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0013 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17121 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 69791, nSrcLost = 17121, nSrcMulti = 57860, MnSrcMultiHits = 1.62549 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.std.mgh #@# 14/25 0014 Wed Jul 3 15:12:11 CEST 2019 mri_annotation2label --subject 0014 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.ctab --annotation aparc.a2009s --segbase 0 subject = 0014 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.mgh surface = white Reading surface /REMOVED_DIR/0014/surf/rh.white Loading annotations from /REMOVED_DIR/0014/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0014 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0014 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 23611 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 83145, nSrcLost = 23611, nSrcMulti = 59591, MnSrcMultiHits = 1.35418 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.std.mgh #@# 15/25 0015 Wed Jul 3 15:12:22 CEST 2019 mri_annotation2label --subject 0015 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.ctab --annotation aparc.a2009s --segbase 0 subject = 0015 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.mgh surface = white Reading surface /REMOVED_DIR/0015/surf/rh.white Loading annotations from /REMOVED_DIR/0015/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0015 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0015 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 15585 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 64237, nSrcLost = 15585, nSrcMulti = 57898, MnSrcMultiHits = 1.72035 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.std.mgh #@# 16/25 0016 Wed Jul 3 15:12:32 CEST 2019 mri_annotation2label --subject 0016 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.ctab --annotation aparc.a2009s --segbase 0 subject = 0016 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.mgh surface = white Reading surface /REMOVED_DIR/0016/surf/rh.white Loading annotations from /REMOVED_DIR/0016/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0016 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0016 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19280 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 77954, nSrcLost = 19280, nSrcMulti = 57501, MnSrcMultiHits = 1.49368 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.std.mgh #@# 17/25 0017 Wed Jul 3 15:12:43 CEST 2019 mri_annotation2label --subject 0017 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.ctab --annotation aparc.a2009s --segbase 0 subject = 0017 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.mgh surface = white Reading surface /REMOVED_DIR/0017/surf/rh.white Loading annotations from /REMOVED_DIR/0017/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0017 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0017 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 19569 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 75698, nSrcLost = 19569, nSrcMulti = 58381, MnSrcMultiHits = 1.50981 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.std.mgh #@# 18/25 0018 Wed Jul 3 15:12:53 CEST 2019 mri_annotation2label --subject 0018 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.ctab --annotation aparc.a2009s --segbase 0 subject = 0018 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.mgh surface = white Reading surface /REMOVED_DIR/0018/surf/rh.white Loading annotations from /REMOVED_DIR/0018/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0018 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0018 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 21170 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 78725, nSrcLost = 21170, nSrcMulti = 59070, MnSrcMultiHits = 1.44095 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.std.mgh #@# 19/25 0019 Wed Jul 3 15:13:05 CEST 2019 mri_annotation2label --subject 0019 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.ctab --annotation aparc.a2009s --segbase 0 subject = 0019 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.mgh surface = white Reading surface /REMOVED_DIR/0019/surf/rh.white Loading annotations from /REMOVED_DIR/0019/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0019 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0019 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 27283 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 88968, nSrcLost = 27283, nSrcMulti = 60993, MnSrcMultiHits = 1.22758 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.std.mgh #@# 20/25 0020 Wed Jul 3 15:13:17 CEST 2019 mri_annotation2label --subject 0020 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.ctab --annotation aparc.a2009s --segbase 0 subject = 0020 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.mgh surface = white Reading surface /REMOVED_DIR/0020/surf/rh.white Loading annotations from /REMOVED_DIR/0020/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0020 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0020 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17757 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 71934, nSrcLost = 17757, nSrcMulti = 57572, MnSrcMultiHits = 1.5964 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.std.mgh #@# 21/25 0021 Wed Jul 3 15:13:27 CEST 2019 mri_annotation2label --subject 0021 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.ctab --annotation aparc.a2009s --segbase 0 subject = 0021 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.mgh surface = white Reading surface /REMOVED_DIR/0021/surf/rh.white Loading annotations from /REMOVED_DIR/0021/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0021 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0021 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 29819 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 93279, nSrcLost = 29819, nSrcMulti = 61848, MnSrcMultiHits = 1.14091 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.std.mgh #@# 22/25 0022 Wed Jul 3 15:13:39 CEST 2019 mri_annotation2label --subject 0022 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.ctab --annotation aparc.a2009s --segbase 0 subject = 0022 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.mgh surface = white Reading surface /REMOVED_DIR/0022/surf/rh.white Loading annotations from /REMOVED_DIR/0022/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0022 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0022 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 27767 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 90708, nSrcLost = 27767, nSrcMulti = 60636, MnSrcMultiHits = 1.20612 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.std.mgh #@# 23/25 0023 Wed Jul 3 15:13:51 CEST 2019 mri_annotation2label --subject 0023 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.ctab --annotation aparc.a2009s --segbase 0 subject = 0023 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.mgh surface = white Reading surface /REMOVED_DIR/0023/surf/rh.white Loading annotations from /REMOVED_DIR/0023/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0023 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 17387 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70162, nSrcLost = 17387, nSrcMulti = 58425, MnSrcMultiHits = 1.60342 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.std.mgh #@# 24/25 0024 Wed Jul 3 15:14:01 CEST 2019 mri_annotation2label --subject 0024 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.ctab --annotation aparc.a2009s --segbase 0 subject = 0024 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.mgh surface = white Reading surface /REMOVED_DIR/0024/surf/rh.white Loading annotations from /REMOVED_DIR/0024/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0024 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0024 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 14870 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 70107, nSrcLost = 14870, nSrcMulti = 55980, MnSrcMultiHits = 1.67444 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.std.mgh #@# 25/25 0025 Wed Jul 3 15:14:11 CEST 2019 mri_annotation2label --subject 0025 --hemi rh --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.ctab --annotation aparc.a2009s --segbase 0 subject = 0025 annotation = aparc.a2009s hemi = rh segfile = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.mgh surface = white Reading surface /REMOVED_DIR/0025/surf/rh.white Loading annotations from /REMOVED_DIR/0025/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Seg base 0 Converting to a segmentation mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0025 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.std.mgh Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --mapmethod nnf --hemi rh --srcsubject 0025 --srcsurfreg sphere.reg --sval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.mgh --trgsubject avg_elder --trgsurfreg sphere.reg --tval /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.std.mgh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.mgh srctype = trgsubject = avg_elder trgval = /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.std.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/rh.sphere.reg Loading source data Converting source to float Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 18301 nTrg121 = 163842, nTrgMulti = 0, MnTrgMultiHits = 0 nSrc121 = 73367, nSrcLost = 18301, nSrcMulti = 57973, MnSrcMultiHits = 1.56064 Saving target data Saving to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.std.mgh mri_concat /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.2.0002.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.3.0003.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.4.0004.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.5.0005.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.6.0006.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.7.0023.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.8.0008.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.9.0009.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.10.0010.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.11.0011.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.12.0012.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.13.0013.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.14.0014.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.15.0015.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.16.0016.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.17.0017.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.18.0018.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.19.0019.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.20.0020.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.21.0021.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.22.0022.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.23.0023.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.24.0024.std.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.25.0025.std.mgh --vote --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.vote.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Voting MRIvote: sorting MRIvote: done sorting Writing to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.vote.mgh mri_convert --frame 1 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.vote.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.a2009s.annot.p.mgh mri_convert.bin --frame 1 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.vote.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.a2009s.annot.p.mgh $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.vote.mgh... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) keeping frame 1 writing to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.a2009s.annot.p.mgh... mris_seg2annot --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.vote.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.ctab --s avg_elder --hemi rh --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.a2009s.annot $Id: mris_seg2annot.c,v 1.10 2014/11/15 00:07:19 greve Exp $ cwd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder cmdline mris_seg2annot --seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.vote.mgh --ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.ctab --s avg_elder --hemi rh --o /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.a2009s.annot sysname Linux hostname hyades02 machine x86_64 user mje subject avg_elder hemi rh surfseg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.vote.mgh ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.ctab annotfile /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.a2009s.annot Reading surface seg /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.vote.mgh Reading surface /REMOVED_DIR/avg_elder/surf/rh.white Reading ctab /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.ctab Writing annot to /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/rh.aparc.a2009s.annot Started at Wed Jul 3 15:09:47 CEST 2019 Ended at Wed Jul 3 15:16:12 CEST 2019 Annot2std-Run-Time-Sec 385 annot2std Done mri_annotation2label --subject avg_elder --hemi rh --outdir /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314 --annotation aparc.a2009s subject = avg_elder annotation = aparc.a2009s hemi = rh outdir = /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314 surface = white Reading surface /REMOVED_DIR/avg_elder/surf/rh.white Loading annotations from /REMOVED_DIR/avg_elder/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder/label/tmpdir.annot2std.16867/seg.1.0001.ctab) Seg base 12100 max index = 75 0 11778 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.Unknown.label 1 848 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G&S_frontomargin.label 2 1028 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G&S_occipital_inf.label 3 2304 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G&S_paracentral.label 4 2418 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G&S_subcentral.label 5 933 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G&S_transv_frontopol.label 6 3412 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G&S_cingul-Ant.label 7 2017 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G&S_cingul-Mid-Ant.label 8 2374 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G&S_cingul-Mid-Post.label 9 836 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_cingul-Post-dorsal.label 10 695 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_cingul-Post-ventral.label 11 1755 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_cuneus.label 12 1637 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_front_inf-Opercular.label 13 392 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_front_inf-Orbital.label 14 1025 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_front_inf-Triangul.label 15 3614 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_front_middle.label 16 7770 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_front_sup.label 17 1024 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_Ins_lg&S_cent_ins.label 18 1305 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_insular_short.label 19 2076 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_occipital_middle.label 20 1449 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_occipital_sup.label 21 1796 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_oc-temp_lat-fusifor.label 22 2466 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_oc-temp_med-Lingual.label 23 1764 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_oc-temp_med-Parahip.label 24 2857 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_orbital.label 25 3539 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_pariet_inf-Angular.label 26 3805 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_pariet_inf-Supramar.label 27 3549 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_parietal_sup.label 28 2987 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_postcentral.label 29 3662 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_precentral.label 30 3720 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_precuneus.label 31 865 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_rectus.label 32 629 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_subcallosal.label 33 586 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_temp_sup-G_T_transv.label 34 2292 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_temp_sup-Lateral.label 35 1074 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_temp_sup-Plan_polar.label 36 1270 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_temp_sup-Plan_tempo.label 37 2019 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_temporal_inf.label 38 2911 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.G_temporal_middle.label 39 529 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.Lat_Fis-ant-Horizont.label 40 331 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.Lat_Fis-ant-Vertical.label 41 2511 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.Lat_Fis-post.label 42 0 empty --- skipping 43 2771 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.Pole_occipital.label 44 1748 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.Pole_temporal.label 45 2826 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_calcarine.label 46 4781 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_central.label 47 2374 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_cingul-Marginalis.label 48 917 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_circular_insula_ant.label 49 2074 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_circular_insula_inf.label 50 2490 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_circular_insula_sup.label 51 1084 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_collat_transv_ant.label 52 349 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_collat_transv_post.label 53 2233 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_front_inf.label 54 2174 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_front_middle.label 55 3012 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_front_sup.label 56 538 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_interm_prim-Jensen.label 57 4662 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_intrapariet&P_trans.label 58 923 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_oc_middle&Lunatus.label 59 1494 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_oc_sup&transversal.label 60 710 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_occipital_ant.label 61 1005 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_oc-temp_lat.label 62 2275 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_oc-temp_med&Lingual.label 63 484 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_orbital_lateral.label 64 975 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_orbital_med-olfact.label 65 1412 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_orbital-H_Shaped.label 66 2485 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_parieto_occipital.label 67 2497 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_pericallosal.label 68 4126 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_postcentral.label 69 2056 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_precentral-inf-part.label 70 2024 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_precentral-sup-part.label 71 289 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_suborbital.label 72 1808 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_subparietal.label 73 1286 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_temporal_inf.label 74 7729 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_temporal_sup.label 75 379 /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314/rh.S_temporal_transverse.label mri_mergelabels -o /REMOVED_DIR/avg_elder/label/rh.cortex.label -d /REMOVED_DIR/avg_elder/make_cortex_label.tmp.22314 Done mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.sulc.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas sulc --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.sulc.log nsubjects = 25 tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.sulc.log Wed Jul 3 15:16:21 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.sulc.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas sulc --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.sulc.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 15:16:21 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (132582) Reverse Loop had 19457 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147985, nTrgMulti = 15857, MnTrgMultiHits = 2.22703 nSrc121 = 93405, nSrcLost = 0, nSrcMulti = 39177, MnSrcMultiHits = 2.29456 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 15:16:31 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141191) Reverse Loop had 22506 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145502, nTrgMulti = 18340, MnTrgMultiHits = 2.22715 nSrc121 = 104949, nSrcLost = 0, nSrcMulti = 36242, MnSrcMultiHits = 2.24599 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 15:16:41 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134697) Reverse Loop had 19424 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147836, nTrgMulti = 16006, MnTrgMultiHits = 2.21354 nSrc121 = 96788, nSrcLost = 0, nSrcMulti = 37909, MnSrcMultiHits = 2.2812 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 15:16:51 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (148071) Reverse Loop had 25270 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143354, nTrgMulti = 20488, MnTrgMultiHits = 2.2334 nSrc121 = 113978, nSrcLost = 0, nSrcMulti = 34093, MnSrcMultiHits = 2.2038 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 15:17:01 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (139396) Reverse Loop had 22145 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145869, nTrgMulti = 17973, MnTrgMultiHits = 2.23213 nSrc121 = 101952, nSrcLost = 0, nSrcMulti = 37444, MnSrcMultiHits = 2.24428 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 15:17:11 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146954) Reverse Loop had 26518 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 142711, nTrgMulti = 21131, MnTrgMultiHits = 2.25493 nSrc121 = 112060, nSrcLost = 0, nSrcMulti = 34894, MnSrcMultiHits = 2.24394 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 15:17:23 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128587) Reverse Loop had 17387 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 15:17:33 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (124059) Reverse Loop had 15586 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151007, nTrgMulti = 12835, MnTrgMultiHits = 2.21434 nSrc121 = 81937, nSrcLost = 0, nSrcMulti = 42122, MnSrcMultiHits = 2.31449 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 15:17:42 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141875) Reverse Loop had 22978 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144976, nTrgMulti = 18866, MnTrgMultiHits = 2.21796 nSrc121 = 105894, nSrcLost = 0, nSrcMulti = 35981, MnSrcMultiHits = 2.24913 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 15:17:53 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (160635) Reverse Loop had 33647 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 137241, nTrgMulti = 26601, MnTrgMultiHits = 2.26488 nSrc121 = 129521, nSrcLost = 0, nSrcMulti = 31114, MnSrcMultiHits = 2.18448 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 15:18:05 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146390) Reverse Loop had 24896 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143337, nTrgMulti = 20505, MnTrgMultiHits = 2.21414 nSrc121 = 111418, nSrcLost = 0, nSrcMulti = 34972, MnSrcMultiHits = 2.21091 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 15:18:16 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134477) Reverse Loop had 19955 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147787, nTrgMulti = 16055, MnTrgMultiHits = 2.24291 nSrc121 = 95620, nSrcLost = 0, nSrcMulti = 38857, MnSrcMultiHits = 2.26927 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 15:18:26 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (127651) Reverse Loop had 17121 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149806, nTrgMulti = 14036, MnTrgMultiHits = 2.21979 nSrc121 = 86912, nSrcLost = 0, nSrcMulti = 40739, MnSrcMultiHits = 2.30862 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 15:18:35 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (142736) Reverse Loop had 23611 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144722, nTrgMulti = 19120, MnTrgMultiHits = 2.23488 nSrc121 = 106756, nSrcLost = 0, nSrcMulti = 35980, MnSrcMultiHits = 2.24283 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 15:18:47 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122135) Reverse Loop had 15585 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151048, nTrgMulti = 12794, MnTrgMultiHits = 2.21815 nSrc121 = 79822, nSrcLost = 0, nSrcMulti = 42313, MnSrcMultiHits = 2.354 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 15:18:56 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135455) Reverse Loop had 19280 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147908, nTrgMulti = 15934, MnTrgMultiHits = 2.20999 nSrc121 = 97234, nSrcLost = 0, nSrcMulti = 38221, MnSrcMultiHits = 2.24714 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 15:19:07 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134079) Reverse Loop had 19569 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147936, nTrgMulti = 15906, MnTrgMultiHits = 2.23029 nSrc121 = 95267, nSrcLost = 0, nSrcMulti = 38812, MnSrcMultiHits = 2.27105 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 15:19:17 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137795) Reverse Loop had 21170 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146512, nTrgMulti = 17330, MnTrgMultiHits = 2.22158 nSrc121 = 99895, nSrcLost = 0, nSrcMulti = 37900, MnSrcMultiHits = 2.24583 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 15:19:27 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (149961) Reverse Loop had 27283 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141723, nTrgMulti = 22119, MnTrgMultiHits = 2.23346 nSrc121 = 116251, nSrcLost = 0, nSrcMulti = 33710, MnSrcMultiHits = 2.22112 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 15:19:38 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (129506) Reverse Loop had 17757 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149030, nTrgMulti = 14812, MnTrgMultiHits = 2.19883 nSrc121 = 89691, nSrcLost = 0, nSrcMulti = 39815, MnSrcMultiHits = 2.30838 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 15:19:48 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (155127) Reverse Loop had 29819 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 139807, nTrgMulti = 24035, MnTrgMultiHits = 2.24065 nSrc121 = 123098, nSrcLost = 0, nSrcMulti = 32029, MnSrcMultiHits = 2.2031 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 15:19:59 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (151344) Reverse Loop had 27767 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141290, nTrgMulti = 22552, MnTrgMultiHits = 2.23124 nSrc121 = 118475, nSrcLost = 0, nSrcMulti = 32869, MnSrcMultiHits = 2.22501 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 15:20:10 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128587) Reverse Loop had 17387 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 15:20:20 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (126087) Reverse Loop had 14870 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151257, nTrgMulti = 12585, MnTrgMultiHits = 2.18157 nSrc121 = 84977, nSrcLost = 0, nSrcMulti = 41110, MnSrcMultiHits = 2.2801 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 15:20:29 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/rh.sulc srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (131340) Reverse Loop had 18301 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148835, nTrgMulti = 15007, MnTrgMultiHits = 2.2195 nSrc121 = 91668, nSrcLost = 0, nSrcMulti = 39672, MnSrcMultiHits = 2.28058 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.rh.sulc.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.rh.sulc.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.19595 Wed Jul 3 15:20:40 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.sulc.mgh --mean --o /REMOVED_DIR/avg_elder/surf/rh.sulc.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/rh.sulc.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.sulc.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.rh.sulc.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.rh.sulc.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.sulc.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.sulc --trg_type curv --hemi rh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.sulc.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.sulc --trg_type curv --hemi rh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/rh.sulc.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/rh.sulc trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.curv.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas curv --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.curv.log nsubjects = 25 tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.curv.log Wed Jul 3 15:20:44 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.curv.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas curv --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.curv.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 15:20:44 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (132582) Reverse Loop had 19457 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147985, nTrgMulti = 15857, MnTrgMultiHits = 2.22703 nSrc121 = 93405, nSrcLost = 0, nSrcMulti = 39177, MnSrcMultiHits = 2.29456 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 15:20:54 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141191) Reverse Loop had 22506 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145502, nTrgMulti = 18340, MnTrgMultiHits = 2.22715 nSrc121 = 104949, nSrcLost = 0, nSrcMulti = 36242, MnSrcMultiHits = 2.24599 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 15:21:05 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134697) Reverse Loop had 19424 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147836, nTrgMulti = 16006, MnTrgMultiHits = 2.21354 nSrc121 = 96788, nSrcLost = 0, nSrcMulti = 37909, MnSrcMultiHits = 2.2812 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 15:21:15 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (148071) Reverse Loop had 25270 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143354, nTrgMulti = 20488, MnTrgMultiHits = 2.2334 nSrc121 = 113978, nSrcLost = 0, nSrcMulti = 34093, MnSrcMultiHits = 2.2038 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 15:21:26 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (139396) Reverse Loop had 22145 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145869, nTrgMulti = 17973, MnTrgMultiHits = 2.23213 nSrc121 = 101952, nSrcLost = 0, nSrcMulti = 37444, MnSrcMultiHits = 2.24428 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 15:21:36 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146954) Reverse Loop had 26518 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 142711, nTrgMulti = 21131, MnTrgMultiHits = 2.25493 nSrc121 = 112060, nSrcLost = 0, nSrcMulti = 34894, MnSrcMultiHits = 2.24394 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 15:21:47 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128587) Reverse Loop had 17387 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 15:21:57 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (124059) Reverse Loop had 15586 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151007, nTrgMulti = 12835, MnTrgMultiHits = 2.21434 nSrc121 = 81937, nSrcLost = 0, nSrcMulti = 42122, MnSrcMultiHits = 2.31449 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 15:22:06 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141875) Reverse Loop had 22978 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144976, nTrgMulti = 18866, MnTrgMultiHits = 2.21796 nSrc121 = 105894, nSrcLost = 0, nSrcMulti = 35981, MnSrcMultiHits = 2.24913 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 15:22:16 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (160635) Reverse Loop had 33647 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 137241, nTrgMulti = 26601, MnTrgMultiHits = 2.26488 nSrc121 = 129521, nSrcLost = 0, nSrcMulti = 31114, MnSrcMultiHits = 2.18448 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 15:22:28 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146390) Reverse Loop had 24896 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143337, nTrgMulti = 20505, MnTrgMultiHits = 2.21414 nSrc121 = 111418, nSrcLost = 0, nSrcMulti = 34972, MnSrcMultiHits = 2.21091 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 15:22:39 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134477) Reverse Loop had 19955 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147787, nTrgMulti = 16055, MnTrgMultiHits = 2.24291 nSrc121 = 95620, nSrcLost = 0, nSrcMulti = 38857, MnSrcMultiHits = 2.26927 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 15:22:48 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (127651) Reverse Loop had 17121 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149806, nTrgMulti = 14036, MnTrgMultiHits = 2.21979 nSrc121 = 86912, nSrcLost = 0, nSrcMulti = 40739, MnSrcMultiHits = 2.30862 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 15:22:58 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (142736) Reverse Loop had 23611 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144722, nTrgMulti = 19120, MnTrgMultiHits = 2.23488 nSrc121 = 106756, nSrcLost = 0, nSrcMulti = 35980, MnSrcMultiHits = 2.24283 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 15:23:08 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122135) Reverse Loop had 15585 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151048, nTrgMulti = 12794, MnTrgMultiHits = 2.21815 nSrc121 = 79822, nSrcLost = 0, nSrcMulti = 42313, MnSrcMultiHits = 2.354 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 15:23:17 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135455) Reverse Loop had 19280 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147908, nTrgMulti = 15934, MnTrgMultiHits = 2.20999 nSrc121 = 97234, nSrcLost = 0, nSrcMulti = 38221, MnSrcMultiHits = 2.24714 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 15:23:27 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134079) Reverse Loop had 19569 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147936, nTrgMulti = 15906, MnTrgMultiHits = 2.23029 nSrc121 = 95267, nSrcLost = 0, nSrcMulti = 38812, MnSrcMultiHits = 2.27105 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 15:23:37 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137795) Reverse Loop had 21170 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146512, nTrgMulti = 17330, MnTrgMultiHits = 2.22158 nSrc121 = 99895, nSrcLost = 0, nSrcMulti = 37900, MnSrcMultiHits = 2.24583 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 15:23:47 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (149961) Reverse Loop had 27283 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141723, nTrgMulti = 22119, MnTrgMultiHits = 2.23346 nSrc121 = 116251, nSrcLost = 0, nSrcMulti = 33710, MnSrcMultiHits = 2.22112 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 15:23:58 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (129506) Reverse Loop had 17757 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149030, nTrgMulti = 14812, MnTrgMultiHits = 2.19883 nSrc121 = 89691, nSrcLost = 0, nSrcMulti = 39815, MnSrcMultiHits = 2.30838 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 15:24:08 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (155127) Reverse Loop had 29819 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 139807, nTrgMulti = 24035, MnTrgMultiHits = 2.24065 nSrc121 = 123098, nSrcLost = 0, nSrcMulti = 32029, MnSrcMultiHits = 2.2031 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 15:24:19 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (151344) Reverse Loop had 27767 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141290, nTrgMulti = 22552, MnTrgMultiHits = 2.23124 nSrc121 = 118475, nSrcLost = 0, nSrcMulti = 32869, MnSrcMultiHits = 2.22501 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 15:24:30 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128587) Reverse Loop had 17387 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 15:24:39 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (126087) Reverse Loop had 14870 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151257, nTrgMulti = 12585, MnTrgMultiHits = 2.18157 nSrc121 = 84977, nSrcLost = 0, nSrcMulti = 41110, MnSrcMultiHits = 2.2801 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 15:24:49 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/rh.curv srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (131340) Reverse Loop had 18301 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148835, nTrgMulti = 15007, MnTrgMultiHits = 2.2195 nSrc121 = 91668, nSrcLost = 0, nSrcMulti = 39672, MnSrcMultiHits = 2.28058 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.rh.curv.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.rh.curv.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.21784 Wed Jul 3 15:24:59 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.curv.mgh --mean --o /REMOVED_DIR/avg_elder/surf/rh.curv.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/rh.curv.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.curv.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.rh.curv.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.rh.curv.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.curv.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.curv --trg_type curv --hemi rh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.curv.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.curv --trg_type curv --hemi rh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/rh.curv.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/rh.curv trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.thickness.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas thickness --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.thickness.log nsubjects = 25 tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.thickness.log Wed Jul 3 15:25:04 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.thickness.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas thickness --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.thickness.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 15:25:04 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (132582) Reverse Loop had 19457 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147985, nTrgMulti = 15857, MnTrgMultiHits = 2.22703 nSrc121 = 93405, nSrcLost = 0, nSrcMulti = 39177, MnSrcMultiHits = 2.29456 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 15:25:13 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141191) Reverse Loop had 22506 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145502, nTrgMulti = 18340, MnTrgMultiHits = 2.22715 nSrc121 = 104949, nSrcLost = 0, nSrcMulti = 36242, MnSrcMultiHits = 2.24599 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 15:25:23 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134697) Reverse Loop had 19424 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147836, nTrgMulti = 16006, MnTrgMultiHits = 2.21354 nSrc121 = 96788, nSrcLost = 0, nSrcMulti = 37909, MnSrcMultiHits = 2.2812 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 15:25:34 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (148071) Reverse Loop had 25270 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143354, nTrgMulti = 20488, MnTrgMultiHits = 2.2334 nSrc121 = 113978, nSrcLost = 0, nSrcMulti = 34093, MnSrcMultiHits = 2.2038 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 15:25:44 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (139396) Reverse Loop had 22145 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145869, nTrgMulti = 17973, MnTrgMultiHits = 2.23213 nSrc121 = 101952, nSrcLost = 0, nSrcMulti = 37444, MnSrcMultiHits = 2.24428 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 15:25:54 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146954) Reverse Loop had 26518 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 142711, nTrgMulti = 21131, MnTrgMultiHits = 2.25493 nSrc121 = 112060, nSrcLost = 0, nSrcMulti = 34894, MnSrcMultiHits = 2.24394 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 15:26:05 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128587) Reverse Loop had 17387 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 15:26:14 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (124059) Reverse Loop had 15586 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151007, nTrgMulti = 12835, MnTrgMultiHits = 2.21434 nSrc121 = 81937, nSrcLost = 0, nSrcMulti = 42122, MnSrcMultiHits = 2.31449 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 15:26:24 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141875) Reverse Loop had 22978 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144976, nTrgMulti = 18866, MnTrgMultiHits = 2.21796 nSrc121 = 105894, nSrcLost = 0, nSrcMulti = 35981, MnSrcMultiHits = 2.24913 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 15:26:34 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (160635) Reverse Loop had 33647 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 137241, nTrgMulti = 26601, MnTrgMultiHits = 2.26488 nSrc121 = 129521, nSrcLost = 0, nSrcMulti = 31114, MnSrcMultiHits = 2.18448 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 15:26:46 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146390) Reverse Loop had 24896 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143337, nTrgMulti = 20505, MnTrgMultiHits = 2.21414 nSrc121 = 111418, nSrcLost = 0, nSrcMulti = 34972, MnSrcMultiHits = 2.21091 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 15:26:56 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134477) Reverse Loop had 19955 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147787, nTrgMulti = 16055, MnTrgMultiHits = 2.24291 nSrc121 = 95620, nSrcLost = 0, nSrcMulti = 38857, MnSrcMultiHits = 2.26927 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 15:27:06 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (127651) Reverse Loop had 17121 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149806, nTrgMulti = 14036, MnTrgMultiHits = 2.21979 nSrc121 = 86912, nSrcLost = 0, nSrcMulti = 40739, MnSrcMultiHits = 2.30862 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 15:27:16 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (142736) Reverse Loop had 23611 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144722, nTrgMulti = 19120, MnTrgMultiHits = 2.23488 nSrc121 = 106756, nSrcLost = 0, nSrcMulti = 35980, MnSrcMultiHits = 2.24283 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 15:27:27 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122135) Reverse Loop had 15585 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151048, nTrgMulti = 12794, MnTrgMultiHits = 2.21815 nSrc121 = 79822, nSrcLost = 0, nSrcMulti = 42313, MnSrcMultiHits = 2.354 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 15:27:36 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135455) Reverse Loop had 19280 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147908, nTrgMulti = 15934, MnTrgMultiHits = 2.20999 nSrc121 = 97234, nSrcLost = 0, nSrcMulti = 38221, MnSrcMultiHits = 2.24714 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 15:27:46 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134079) Reverse Loop had 19569 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147936, nTrgMulti = 15906, MnTrgMultiHits = 2.23029 nSrc121 = 95267, nSrcLost = 0, nSrcMulti = 38812, MnSrcMultiHits = 2.27105 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 15:27:56 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137795) Reverse Loop had 21170 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146512, nTrgMulti = 17330, MnTrgMultiHits = 2.22158 nSrc121 = 99895, nSrcLost = 0, nSrcMulti = 37900, MnSrcMultiHits = 2.24583 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 15:28:06 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (149961) Reverse Loop had 27283 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141723, nTrgMulti = 22119, MnTrgMultiHits = 2.23346 nSrc121 = 116251, nSrcLost = 0, nSrcMulti = 33710, MnSrcMultiHits = 2.22112 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 15:28:17 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (129506) Reverse Loop had 17757 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149030, nTrgMulti = 14812, MnTrgMultiHits = 2.19883 nSrc121 = 89691, nSrcLost = 0, nSrcMulti = 39815, MnSrcMultiHits = 2.30838 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 15:28:27 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (155127) Reverse Loop had 29819 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 139807, nTrgMulti = 24035, MnTrgMultiHits = 2.24065 nSrc121 = 123098, nSrcLost = 0, nSrcMulti = 32029, MnSrcMultiHits = 2.2031 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 15:28:38 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (151344) Reverse Loop had 27767 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141290, nTrgMulti = 22552, MnTrgMultiHits = 2.23124 nSrc121 = 118475, nSrcLost = 0, nSrcMulti = 32869, MnSrcMultiHits = 2.22501 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 15:28:50 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128587) Reverse Loop had 17387 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 15:28:59 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (126087) Reverse Loop had 14870 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151257, nTrgMulti = 12585, MnTrgMultiHits = 2.18157 nSrc121 = 84977, nSrcLost = 0, nSrcMulti = 41110, MnSrcMultiHits = 2.2801 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 15:29:08 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/rh.thickness srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (131340) Reverse Loop had 18301 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148835, nTrgMulti = 15007, MnTrgMultiHits = 2.2195 nSrc121 = 91668, nSrcLost = 0, nSrcMulti = 39672, MnSrcMultiHits = 2.28058 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.rh.thickness.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.rh.thickness.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.24053 Wed Jul 3 15:29:19 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.thickness.mgh --mean --o /REMOVED_DIR/avg_elder/surf/rh.thickness.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/rh.thickness.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.thickness.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.rh.thickness.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.rh.thickness.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.thickness.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.thickness --trg_type curv --hemi rh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.thickness.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.thickness --trg_type curv --hemi rh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/rh.thickness.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/rh.thickness trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.area.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas area --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.area.log nsubjects = 25 INFO: turning on jacobican correction tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.area.log Wed Jul 3 15:29:23 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.area.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas area --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.area.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 15:29:23 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (132582) Reverse Loop had 19457 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147985, nTrgMulti = 15857, MnTrgMultiHits = 2.22703 nSrc121 = 93405, nSrcLost = 0, nSrcMulti = 39177, MnSrcMultiHits = 2.29456 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 15:29:37 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (141191) Reverse Loop had 22506 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 145502, nTrgMulti = 18340, MnTrgMultiHits = 2.22715 nSrc121 = 104949, nSrcLost = 0, nSrcMulti = 36242, MnSrcMultiHits = 2.24599 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 15:29:51 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (134697) Reverse Loop had 19424 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147836, nTrgMulti = 16006, MnTrgMultiHits = 2.21354 nSrc121 = 96788, nSrcLost = 0, nSrcMulti = 37909, MnSrcMultiHits = 2.2812 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 15:30:04 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (148071) Reverse Loop had 25270 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143354, nTrgMulti = 20488, MnTrgMultiHits = 2.2334 nSrc121 = 113978, nSrcLost = 0, nSrcMulti = 34093, MnSrcMultiHits = 2.2038 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 15:30:19 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (139396) Reverse Loop had 22145 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 145869, nTrgMulti = 17973, MnTrgMultiHits = 2.23213 nSrc121 = 101952, nSrcLost = 0, nSrcMulti = 37444, MnSrcMultiHits = 2.24428 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 15:30:32 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (146954) Reverse Loop had 26518 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 142711, nTrgMulti = 21131, MnTrgMultiHits = 2.25493 nSrc121 = 112060, nSrcLost = 0, nSrcMulti = 34894, MnSrcMultiHits = 2.24394 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 15:30:47 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128587) Reverse Loop had 17387 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 15:31:00 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (124059) Reverse Loop had 15586 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151007, nTrgMulti = 12835, MnTrgMultiHits = 2.21434 nSrc121 = 81937, nSrcLost = 0, nSrcMulti = 42122, MnSrcMultiHits = 2.31449 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 15:31:12 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (141875) Reverse Loop had 22978 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 144976, nTrgMulti = 18866, MnTrgMultiHits = 2.21796 nSrc121 = 105894, nSrcLost = 0, nSrcMulti = 35981, MnSrcMultiHits = 2.24913 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 15:31:27 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (160635) Reverse Loop had 33647 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 137241, nTrgMulti = 26601, MnTrgMultiHits = 2.26488 nSrc121 = 129521, nSrcLost = 0, nSrcMulti = 31114, MnSrcMultiHits = 2.18448 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 15:31:43 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (146390) Reverse Loop had 24896 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143337, nTrgMulti = 20505, MnTrgMultiHits = 2.21414 nSrc121 = 111418, nSrcLost = 0, nSrcMulti = 34972, MnSrcMultiHits = 2.21091 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 15:31:58 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (134477) Reverse Loop had 19955 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147787, nTrgMulti = 16055, MnTrgMultiHits = 2.24291 nSrc121 = 95620, nSrcLost = 0, nSrcMulti = 38857, MnSrcMultiHits = 2.26927 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 15:32:11 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (127651) Reverse Loop had 17121 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149806, nTrgMulti = 14036, MnTrgMultiHits = 2.21979 nSrc121 = 86912, nSrcLost = 0, nSrcMulti = 40739, MnSrcMultiHits = 2.30862 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 15:32:24 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (142736) Reverse Loop had 23611 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 144722, nTrgMulti = 19120, MnTrgMultiHits = 2.23488 nSrc121 = 106756, nSrcLost = 0, nSrcMulti = 35980, MnSrcMultiHits = 2.24283 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 15:32:38 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (122135) Reverse Loop had 15585 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151048, nTrgMulti = 12794, MnTrgMultiHits = 2.21815 nSrc121 = 79822, nSrcLost = 0, nSrcMulti = 42313, MnSrcMultiHits = 2.354 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 15:32:50 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (135455) Reverse Loop had 19280 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147908, nTrgMulti = 15934, MnTrgMultiHits = 2.20999 nSrc121 = 97234, nSrcLost = 0, nSrcMulti = 38221, MnSrcMultiHits = 2.24714 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 15:33:03 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (134079) Reverse Loop had 19569 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147936, nTrgMulti = 15906, MnTrgMultiHits = 2.23029 nSrc121 = 95267, nSrcLost = 0, nSrcMulti = 38812, MnSrcMultiHits = 2.27105 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 15:33:17 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (137795) Reverse Loop had 21170 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146512, nTrgMulti = 17330, MnTrgMultiHits = 2.22158 nSrc121 = 99895, nSrcLost = 0, nSrcMulti = 37900, MnSrcMultiHits = 2.24583 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 15:33:30 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (149961) Reverse Loop had 27283 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141723, nTrgMulti = 22119, MnTrgMultiHits = 2.23346 nSrc121 = 116251, nSrcLost = 0, nSrcMulti = 33710, MnSrcMultiHits = 2.22112 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 15:33:45 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (129506) Reverse Loop had 17757 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149030, nTrgMulti = 14812, MnTrgMultiHits = 2.19883 nSrc121 = 89691, nSrcLost = 0, nSrcMulti = 39815, MnSrcMultiHits = 2.30838 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 15:33:58 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (155127) Reverse Loop had 29819 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 139807, nTrgMulti = 24035, MnTrgMultiHits = 2.24065 nSrc121 = 123098, nSrcLost = 0, nSrcMulti = 32029, MnSrcMultiHits = 2.2031 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 15:34:14 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (151344) Reverse Loop had 27767 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141290, nTrgMulti = 22552, MnTrgMultiHits = 2.23124 nSrc121 = 118475, nSrcLost = 0, nSrcMulti = 32869, MnSrcMultiHits = 2.22501 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 15:34:30 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128587) Reverse Loop had 17387 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 15:34:43 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (126087) Reverse Loop had 14870 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151257, nTrgMulti = 12585, MnTrgMultiHits = 2.18157 nSrc121 = 84977, nSrcLost = 0, nSrcMulti = 41110, MnSrcMultiHits = 2.2801 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 15:34:56 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/rh.area srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (131340) Reverse Loop had 18301 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 148835, nTrgMulti = 15007, MnTrgMultiHits = 2.2195 nSrc121 = 91668, nSrcLost = 0, nSrcMulti = 39672, MnSrcMultiHits = 2.28058 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.rh.area.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.rh.area.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.26185 Wed Jul 3 15:35:10 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.area.mgh --mean --o /REMOVED_DIR/avg_elder/surf/rh.white.avg.area.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/rh.white.avg.area.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.area.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.rh.area.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.rh.area.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.white.avg.area.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.area --trg_type curv --hemi rh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.white.avg.area.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.area --trg_type curv --hemi rh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/rh.white.avg.area.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/rh.area trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.volume.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas volume --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.volume.log nsubjects = 25 INFO: turning on jacobican correction tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.volume.log Wed Jul 3 15:35:14 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.volume.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas volume --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.volume.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 15:35:15 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (132582) Reverse Loop had 19457 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147985, nTrgMulti = 15857, MnTrgMultiHits = 2.22703 nSrc121 = 93405, nSrcLost = 0, nSrcMulti = 39177, MnSrcMultiHits = 2.29456 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 15:35:28 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (141191) Reverse Loop had 22506 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 145502, nTrgMulti = 18340, MnTrgMultiHits = 2.22715 nSrc121 = 104949, nSrcLost = 0, nSrcMulti = 36242, MnSrcMultiHits = 2.24599 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 15:35:42 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (134697) Reverse Loop had 19424 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147836, nTrgMulti = 16006, MnTrgMultiHits = 2.21354 nSrc121 = 96788, nSrcLost = 0, nSrcMulti = 37909, MnSrcMultiHits = 2.2812 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 15:35:56 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (148071) Reverse Loop had 25270 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143354, nTrgMulti = 20488, MnTrgMultiHits = 2.2334 nSrc121 = 113978, nSrcLost = 0, nSrcMulti = 34093, MnSrcMultiHits = 2.2038 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 15:36:12 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (139396) Reverse Loop had 22145 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 145869, nTrgMulti = 17973, MnTrgMultiHits = 2.23213 nSrc121 = 101952, nSrcLost = 0, nSrcMulti = 37444, MnSrcMultiHits = 2.24428 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 15:36:25 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (146954) Reverse Loop had 26518 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 142711, nTrgMulti = 21131, MnTrgMultiHits = 2.25493 nSrc121 = 112060, nSrcLost = 0, nSrcMulti = 34894, MnSrcMultiHits = 2.24394 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 15:36:40 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128587) Reverse Loop had 17387 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 15:36:54 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (124059) Reverse Loop had 15586 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151007, nTrgMulti = 12835, MnTrgMultiHits = 2.21434 nSrc121 = 81937, nSrcLost = 0, nSrcMulti = 42122, MnSrcMultiHits = 2.31449 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 15:37:06 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (141875) Reverse Loop had 22978 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 144976, nTrgMulti = 18866, MnTrgMultiHits = 2.21796 nSrc121 = 105894, nSrcLost = 0, nSrcMulti = 35981, MnSrcMultiHits = 2.24913 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 15:37:21 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (160635) Reverse Loop had 33647 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 137241, nTrgMulti = 26601, MnTrgMultiHits = 2.26488 nSrc121 = 129521, nSrcLost = 0, nSrcMulti = 31114, MnSrcMultiHits = 2.18448 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 15:37:37 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (146390) Reverse Loop had 24896 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 143337, nTrgMulti = 20505, MnTrgMultiHits = 2.21414 nSrc121 = 111418, nSrcLost = 0, nSrcMulti = 34972, MnSrcMultiHits = 2.21091 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 15:37:52 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (134477) Reverse Loop had 19955 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147787, nTrgMulti = 16055, MnTrgMultiHits = 2.24291 nSrc121 = 95620, nSrcLost = 0, nSrcMulti = 38857, MnSrcMultiHits = 2.26927 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 15:38:06 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (127651) Reverse Loop had 17121 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149806, nTrgMulti = 14036, MnTrgMultiHits = 2.21979 nSrc121 = 86912, nSrcLost = 0, nSrcMulti = 40739, MnSrcMultiHits = 2.30862 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 15:38:19 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (142736) Reverse Loop had 23611 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 144722, nTrgMulti = 19120, MnTrgMultiHits = 2.23488 nSrc121 = 106756, nSrcLost = 0, nSrcMulti = 35980, MnSrcMultiHits = 2.24283 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 15:38:34 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (122135) Reverse Loop had 15585 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151048, nTrgMulti = 12794, MnTrgMultiHits = 2.21815 nSrc121 = 79822, nSrcLost = 0, nSrcMulti = 42313, MnSrcMultiHits = 2.354 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 15:38:46 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (135455) Reverse Loop had 19280 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147908, nTrgMulti = 15934, MnTrgMultiHits = 2.20999 nSrc121 = 97234, nSrcLost = 0, nSrcMulti = 38221, MnSrcMultiHits = 2.24714 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 15:38:59 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (134079) Reverse Loop had 19569 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 147936, nTrgMulti = 15906, MnTrgMultiHits = 2.23029 nSrc121 = 95267, nSrcLost = 0, nSrcMulti = 38812, MnSrcMultiHits = 2.27105 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 15:39:13 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (137795) Reverse Loop had 21170 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146512, nTrgMulti = 17330, MnTrgMultiHits = 2.22158 nSrc121 = 99895, nSrcLost = 0, nSrcMulti = 37900, MnSrcMultiHits = 2.24583 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 15:39:27 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (149961) Reverse Loop had 27283 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141723, nTrgMulti = 22119, MnTrgMultiHits = 2.23346 nSrc121 = 116251, nSrcLost = 0, nSrcMulti = 33710, MnSrcMultiHits = 2.22112 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 15:39:42 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (129506) Reverse Loop had 17757 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149030, nTrgMulti = 14812, MnTrgMultiHits = 2.19883 nSrc121 = 89691, nSrcLost = 0, nSrcMulti = 39815, MnSrcMultiHits = 2.30838 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 15:39:55 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (155127) Reverse Loop had 29819 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 139807, nTrgMulti = 24035, MnTrgMultiHits = 2.24065 nSrc121 = 123098, nSrcLost = 0, nSrcMulti = 32029, MnSrcMultiHits = 2.2031 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 15:40:11 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (151344) Reverse Loop had 27767 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 141290, nTrgMulti = 22552, MnTrgMultiHits = 2.23124 nSrc121 = 118475, nSrcLost = 0, nSrcMulti = 32869, MnSrcMultiHits = 2.22501 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 15:40:27 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (128587) Reverse Loop had 17387 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 15:40:40 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (126087) Reverse Loop had 14870 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 151257, nTrgMulti = 12585, MnTrgMultiHits = 2.18157 nSrc121 = 84977, nSrcLost = 0, nSrcMulti = 41110, MnSrcMultiHits = 2.2801 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 15:40:54 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/rh.volume srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (131340) Reverse Loop had 18301 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 148835, nTrgMulti = 15007, MnTrgMultiHits = 2.2195 nSrc121 = 91668, nSrcLost = 0, nSrcMulti = 39672, MnSrcMultiHits = 2.28058 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.rh.volume.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.rh.volume.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.28969 Wed Jul 3 15:41:08 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.volume.mgh --mean --o /REMOVED_DIR/avg_elder/surf/rh.volume.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/rh.volume.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.volume.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.rh.volume.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.rh.volume.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.volume.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.volume --trg_type curv --hemi rh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.volume.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.volume --trg_type curv --hemi rh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/rh.volume.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/rh.volume trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.inflated.H.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas inflated.H --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.inflated.H.log nsubjects = 25 tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803 /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder Log file is /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.inflated.H.log Wed Jul 3 15:41:12 CEST 2019 setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder /usr/local/freesurfer/bin/mris_preproc --out /REMOVED_DIR/avg_elder/surf/stack.rh.inflated.H.mgh --f /REMOVED_DIR/avg_elder/list.subjects.txt --target avg_elder --hemi rh --meas inflated.H --srcsurfreg sphere.reg --log /REMOVED_DIR/avg_elder/scripts/mris_preproc.rh.inflated.H.log Linux hyades02 4.4.0-130-generic #156-Ubuntu SMP Thu Jun 14 08:53:28 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/25 0001 Wed Jul 3 15:41:12 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0001 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0001.1.mgh --sval /REMOVED_DIR/0001/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0001 srcval = /REMOVED_DIR/0001/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0001.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0001/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0001/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (132582) Reverse Loop had 19457 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147985, nTrgMulti = 15857, MnTrgMultiHits = 2.22703 nSrc121 = 93405, nSrcLost = 0, nSrcMulti = 39177, MnSrcMultiHits = 2.29456 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0001.1.mgh --------------------------------------------------- #@# 2/25 0002 Wed Jul 3 15:41:22 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0002 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0002.2.mgh --sval /REMOVED_DIR/0002/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0002 srcval = /REMOVED_DIR/0002/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0002.2.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0002/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0002/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141191) Reverse Loop had 22506 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145502, nTrgMulti = 18340, MnTrgMultiHits = 2.22715 nSrc121 = 104949, nSrcLost = 0, nSrcMulti = 36242, MnSrcMultiHits = 2.24599 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0002.2.mgh --------------------------------------------------- #@# 3/25 0003 Wed Jul 3 15:41:33 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0003 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0003.3.mgh --sval /REMOVED_DIR/0003/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0003 srcval = /REMOVED_DIR/0003/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0003.3.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0003/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0003/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134697) Reverse Loop had 19424 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147836, nTrgMulti = 16006, MnTrgMultiHits = 2.21354 nSrc121 = 96788, nSrcLost = 0, nSrcMulti = 37909, MnSrcMultiHits = 2.2812 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0003.3.mgh --------------------------------------------------- #@# 4/25 0004 Wed Jul 3 15:41:43 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0004 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0004.4.mgh --sval /REMOVED_DIR/0004/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0004 srcval = /REMOVED_DIR/0004/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0004.4.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0004/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0004/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (148071) Reverse Loop had 25270 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143354, nTrgMulti = 20488, MnTrgMultiHits = 2.2334 nSrc121 = 113978, nSrcLost = 0, nSrcMulti = 34093, MnSrcMultiHits = 2.2038 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0004.4.mgh --------------------------------------------------- #@# 5/25 0005 Wed Jul 3 15:41:53 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0005 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0005.5.mgh --sval /REMOVED_DIR/0005/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0005 srcval = /REMOVED_DIR/0005/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0005.5.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0005/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0005/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (139396) Reverse Loop had 22145 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145869, nTrgMulti = 17973, MnTrgMultiHits = 2.23213 nSrc121 = 101952, nSrcLost = 0, nSrcMulti = 37444, MnSrcMultiHits = 2.24428 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0005.5.mgh --------------------------------------------------- #@# 6/25 0006 Wed Jul 3 15:42:03 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0006 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0006.6.mgh --sval /REMOVED_DIR/0006/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0006 srcval = /REMOVED_DIR/0006/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0006.6.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0006/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0006/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146954) Reverse Loop had 26518 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 142711, nTrgMulti = 21131, MnTrgMultiHits = 2.25493 nSrc121 = 112060, nSrcLost = 0, nSrcMulti = 34894, MnSrcMultiHits = 2.24394 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0006.6.mgh --------------------------------------------------- #@# 7/25 0023 Wed Jul 3 15:42:14 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.7.mgh --sval /REMOVED_DIR/0023/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.7.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128587) Reverse Loop had 17387 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.7.mgh --------------------------------------------------- #@# 8/25 0008 Wed Jul 3 15:42:24 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0008 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0008.8.mgh --sval /REMOVED_DIR/0008/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0008 srcval = /REMOVED_DIR/0008/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0008.8.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0008/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0008/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (124059) Reverse Loop had 15586 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151007, nTrgMulti = 12835, MnTrgMultiHits = 2.21434 nSrc121 = 81937, nSrcLost = 0, nSrcMulti = 42122, MnSrcMultiHits = 2.31449 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0008.8.mgh --------------------------------------------------- #@# 9/25 0009 Wed Jul 3 15:42:33 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0009 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0009.9.mgh --sval /REMOVED_DIR/0009/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0009 srcval = /REMOVED_DIR/0009/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0009.9.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0009/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0009/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (141875) Reverse Loop had 22978 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144976, nTrgMulti = 18866, MnTrgMultiHits = 2.21796 nSrc121 = 105894, nSrcLost = 0, nSrcMulti = 35981, MnSrcMultiHits = 2.24913 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0009.9.mgh --------------------------------------------------- #@# 10/25 0010 Wed Jul 3 15:42:44 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0010 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0010.10.mgh --sval /REMOVED_DIR/0010/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0010 srcval = /REMOVED_DIR/0010/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0010.10.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0010/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0010/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (160635) Reverse Loop had 33647 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 137241, nTrgMulti = 26601, MnTrgMultiHits = 2.26488 nSrc121 = 129521, nSrcLost = 0, nSrcMulti = 31114, MnSrcMultiHits = 2.18448 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0010.10.mgh --------------------------------------------------- #@# 11/25 0011 Wed Jul 3 15:42:56 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0011 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0011.11.mgh --sval /REMOVED_DIR/0011/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0011 srcval = /REMOVED_DIR/0011/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0011.11.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0011/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0011/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (146390) Reverse Loop had 24896 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 143337, nTrgMulti = 20505, MnTrgMultiHits = 2.21414 nSrc121 = 111418, nSrcLost = 0, nSrcMulti = 34972, MnSrcMultiHits = 2.21091 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0011.11.mgh --------------------------------------------------- #@# 12/25 0012 Wed Jul 3 15:43:06 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0012 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0012.12.mgh --sval /REMOVED_DIR/0012/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0012 srcval = /REMOVED_DIR/0012/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0012.12.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0012/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0012/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134477) Reverse Loop had 19955 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147787, nTrgMulti = 16055, MnTrgMultiHits = 2.24291 nSrc121 = 95620, nSrcLost = 0, nSrcMulti = 38857, MnSrcMultiHits = 2.26927 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0012.12.mgh --------------------------------------------------- #@# 13/25 0013 Wed Jul 3 15:43:17 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0013 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0013.13.mgh --sval /REMOVED_DIR/0013/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0013 srcval = /REMOVED_DIR/0013/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0013.13.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0013/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0013/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (127651) Reverse Loop had 17121 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149806, nTrgMulti = 14036, MnTrgMultiHits = 2.21979 nSrc121 = 86912, nSrcLost = 0, nSrcMulti = 40739, MnSrcMultiHits = 2.30862 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0013.13.mgh --------------------------------------------------- #@# 14/25 0014 Wed Jul 3 15:43:26 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0014 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0014.14.mgh --sval /REMOVED_DIR/0014/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0014 srcval = /REMOVED_DIR/0014/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0014.14.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0014/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0014/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (142736) Reverse Loop had 23611 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 144722, nTrgMulti = 19120, MnTrgMultiHits = 2.23488 nSrc121 = 106756, nSrcLost = 0, nSrcMulti = 35980, MnSrcMultiHits = 2.24283 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0014.14.mgh --------------------------------------------------- #@# 15/25 0015 Wed Jul 3 15:43:36 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0015 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0015.15.mgh --sval /REMOVED_DIR/0015/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0015 srcval = /REMOVED_DIR/0015/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0015.15.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0015/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0015/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (122135) Reverse Loop had 15585 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151048, nTrgMulti = 12794, MnTrgMultiHits = 2.21815 nSrc121 = 79822, nSrcLost = 0, nSrcMulti = 42313, MnSrcMultiHits = 2.354 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0015.15.mgh --------------------------------------------------- #@# 16/25 0016 Wed Jul 3 15:43:46 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0016 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0016.16.mgh --sval /REMOVED_DIR/0016/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0016 srcval = /REMOVED_DIR/0016/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0016.16.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0016/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0016/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (135455) Reverse Loop had 19280 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147908, nTrgMulti = 15934, MnTrgMultiHits = 2.20999 nSrc121 = 97234, nSrcLost = 0, nSrcMulti = 38221, MnSrcMultiHits = 2.24714 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0016.16.mgh --------------------------------------------------- #@# 17/25 0017 Wed Jul 3 15:43:56 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0017 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0017.17.mgh --sval /REMOVED_DIR/0017/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0017 srcval = /REMOVED_DIR/0017/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0017.17.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0017/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0017/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (134079) Reverse Loop had 19569 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 147936, nTrgMulti = 15906, MnTrgMultiHits = 2.23029 nSrc121 = 95267, nSrcLost = 0, nSrcMulti = 38812, MnSrcMultiHits = 2.27105 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0017.17.mgh --------------------------------------------------- #@# 18/25 0018 Wed Jul 3 15:44:06 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0018 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0018.18.mgh --sval /REMOVED_DIR/0018/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0018 srcval = /REMOVED_DIR/0018/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0018.18.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0018/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0018/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137795) Reverse Loop had 21170 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146512, nTrgMulti = 17330, MnTrgMultiHits = 2.22158 nSrc121 = 99895, nSrcLost = 0, nSrcMulti = 37900, MnSrcMultiHits = 2.24583 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0018.18.mgh --------------------------------------------------- #@# 19/25 0019 Wed Jul 3 15:44:16 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0019 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0019.19.mgh --sval /REMOVED_DIR/0019/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0019 srcval = /REMOVED_DIR/0019/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0019.19.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0019/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0019/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (149961) Reverse Loop had 27283 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141723, nTrgMulti = 22119, MnTrgMultiHits = 2.23346 nSrc121 = 116251, nSrcLost = 0, nSrcMulti = 33710, MnSrcMultiHits = 2.22112 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0019.19.mgh --------------------------------------------------- #@# 20/25 0020 Wed Jul 3 15:44:27 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0020 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0020.20.mgh --sval /REMOVED_DIR/0020/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0020 srcval = /REMOVED_DIR/0020/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0020.20.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0020/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0020/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (129506) Reverse Loop had 17757 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149030, nTrgMulti = 14812, MnTrgMultiHits = 2.19883 nSrc121 = 89691, nSrcLost = 0, nSrcMulti = 39815, MnSrcMultiHits = 2.30838 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0020.20.mgh --------------------------------------------------- #@# 21/25 0021 Wed Jul 3 15:44:37 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0021 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0021.21.mgh --sval /REMOVED_DIR/0021/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0021 srcval = /REMOVED_DIR/0021/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0021.21.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0021/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0021/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (155127) Reverse Loop had 29819 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 139807, nTrgMulti = 24035, MnTrgMultiHits = 2.24065 nSrc121 = 123098, nSrcLost = 0, nSrcMulti = 32029, MnSrcMultiHits = 2.2031 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0021.21.mgh --------------------------------------------------- #@# 22/25 0022 Wed Jul 3 15:44:48 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0022 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0022.22.mgh --sval /REMOVED_DIR/0022/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0022 srcval = /REMOVED_DIR/0022/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0022.22.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0022/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0022/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (151344) Reverse Loop had 27767 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 141290, nTrgMulti = 22552, MnTrgMultiHits = 2.23124 nSrc121 = 118475, nSrcLost = 0, nSrcMulti = 32869, MnSrcMultiHits = 2.22501 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0022.22.mgh --------------------------------------------------- #@# 23/25 0023 Wed Jul 3 15:44:59 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0023 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.23.mgh --sval /REMOVED_DIR/0023/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0023 srcval = /REMOVED_DIR/0023/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.23.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0023/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0023/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (128587) Reverse Loop had 17387 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149957, nTrgMulti = 13885, MnTrgMultiHits = 2.25221 nSrc121 = 87549, nSrcLost = 0, nSrcMulti = 41038, MnSrcMultiHits = 2.28276 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.23.mgh --------------------------------------------------- #@# 24/25 0024 Wed Jul 3 15:45:09 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0024 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0024.24.mgh --sval /REMOVED_DIR/0024/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0024 srcval = /REMOVED_DIR/0024/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0024.24.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0024/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0024/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (126087) Reverse Loop had 14870 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 151257, nTrgMulti = 12585, MnTrgMultiHits = 2.18157 nSrc121 = 84977, nSrcLost = 0, nSrcMulti = 41110, MnSrcMultiHits = 2.2801 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0024.24.mgh --------------------------------------------------- #@# 25/25 0025 Wed Jul 3 15:45:18 CEST 2019 -------------- ----------------------- mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.inflated.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --srcsubject 0025 --srchemi rh --srcsurfreg sphere.reg --trgsubject avg_elder --trghemi rh --trgsurfreg sphere.reg --tval /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0025.25.mgh --sval /REMOVED_DIR/0025/surf/rh.inflated.H --sfmt curv --noreshape --cortex sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = 0025 srcval = /REMOVED_DIR/0025/surf/rh.inflated.H srctype = curv trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0025.25.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/0025/surf/rh.sphere.reg Loading source data Reading curvature file /REMOVED_DIR/0025/surf/rh.inflated.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (131340) Reverse Loop had 18301 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 148835, nTrgMulti = 15007, MnTrgMultiHits = 2.2195 nSrc121 = 91668, nSrcLost = 0, nSrcMulti = 39672, MnSrcMultiHits = 2.28058 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0025.25.mgh ----------------------- mri_concat /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0001.1.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0002.2.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0003.3.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0004.4.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0005.5.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0006.6.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.7.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0008.8.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0009.9.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0010.10.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0011.11.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0012.12.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0013.13.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0014.14.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0015.15.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0016.16.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0017.17.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0018.18.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0019.19.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0020.20.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0021.21.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0022.22.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0023.23.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0024.24.mgh /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803/0025.25.mgh --o /REMOVED_DIR/avg_elder/surf/stack.rh.inflated.H.mgh ninputs = 25 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Writing to /REMOVED_DIR/avg_elder/surf/stack.rh.inflated.H.mgh Cleaning up ----------------------- rm -r /REMOVED_DIR/avg_elder/surf/tmp.mris_preproc.31803 Wed Jul 3 15:45:28 CEST 2019 mris_preproc done mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.inflated.H.mgh --mean --o /REMOVED_DIR/avg_elder/surf/rh.inflated.H.avg.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing mean across frames Writing to /REMOVED_DIR/avg_elder/surf/rh.inflated.H.avg.mgh mri_concat /REMOVED_DIR/avg_elder/surf/stack.rh.inflated.H.mgh --std --o /REMOVED_DIR/avg_elder/surf/std.rh.inflated.H.mgh ninputs = 1 Checking inputs nframestot = 25 Allocing output Done allocing nframes = 25 Computing std/var across frames Writing to /REMOVED_DIR/avg_elder/surf/std.rh.inflated.H.mgh /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.inflated.H.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.inflated.H --trg_type curv --hemi rh $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /REMOVED_DIR cd /scratch5/MINDLAB2016_MR-PD-MCI/fs_subjects_dir/avg_elder mri_surf2surf --sval /REMOVED_DIR/avg_elder/surf/rh.inflated.H.avg.mgh --s avg_elder --tval /REMOVED_DIR/avg_elder/surf/rh.inflated.H --trg_type curv --hemi rh sysname Linux hostname hyades02 machine x86_64 user mje srcsubject = avg_elder srcval = /REMOVED_DIR/avg_elder/surf/rh.inflated.H.avg.mgh srctype = trgsubject = avg_elder trgval = /REMOVED_DIR/avg_elder/surf/rh.inflated.H trgtype = curv srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = (null) label-trg = (null) OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /REMOVED_DIR/avg_elder/surf/rh.sphere.reg Loading source data INFO: trgsubject = srcsubject Saving target data --------------------------------------------------- make_average_surface-Run-Time-Hours 1.65 Wed Jul 3 15:45:32 CEST 2019 make_average_surface done