Hi Loic

if you are on the fsaverage surface you can save the -log10(p) values
using save_mgh.m, then load them in freeview and threshold them or
whatever

cheers
Bruce
On Mon, 20 May 2019, Loïc Daumail wrote:

>
>         External Email - Use Caution        
>
> Also, one more thing:
>
> My data is on fsaverage5 resolution.
>
> Thanks in advance,
>
> Sincerely,
>
> Loïc
>
> Le lun. 20 mai 2019 à 09:49, Loïc Daumail <loic.daumail@gmail.com> a écrit :
>       Dear Freesurfer community,
>
> I obtained score matrices of surfaces after performing diffusion embedding map on fMRI data.
>
> I am now using the SurfStat toolbox(Matlab) in order to obtain p-value maps to compare between
> two groups.
>
> After obtaining the p-value map, I would like to label the surface in order to identify the
> regions of significant difference between both groups.
>
> Would it be possible to use Freview in order to do it?
> If so, which format should I use for my SurfStatP output p-value map?
> How would you do it, (tools to convert into a specific format, surfaces and atlas to load on
> Freeview, which format for those ones)?
> I would be very grateful if you could detail a bit, as I am new to these tools!
>
> Thanks in advance,
>
> Loïc Daumail
>
>
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