Wed Sep 3 13:07:02 CEST 2025 cd /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1 setenv SUBJECTS_DIR /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon /Applications/freesurfer/8.1.0//bin/recon-all -s NVR-1 -sd /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon -i /Volumes/INTENSO/Projects/NeuroVR+/MRI/Nifti/NVR-1_nii/5_t1_tfl3d_sag_ti1090_fa9_tr2700_09mm_p2.nii.gz -T2 /Volumes/INTENSO/Projects/NeuroVR+/MRI/Nifti/NVR-1_nii/6_t2_space_sag_081x081x09mm_p2.nii.gz -T2pial -all subjid NVR-1 setenv SUBJECTS_DIR /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon FREESURFER_HOME /Applications/freesurfer/8.1.0/ Actual FREESURFER_HOME /Applications/freesurfer/8.1.0 build-stamp.txt: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed Darwin MBP-von-Lukas.wlan.med.uni-goettingen.de 23.6.0 Darwin Kernel Version 23.6.0: Mon Jul 29 21:14:04 PDT 2024; root:xnu-10063.141.2~1/RELEASE_ARM64_T8122 arm64 cputime unlimited filesize unlimited datasize unlimited stacksize 8176 kbytes coredumpsize 0 kbytes memoryuse unlimited descriptors 256 memorylocked unlimited maxproc 2666 PhysMem: 11G used (2101M wired, 593M compressor), 4472M unused. ######################################## program versions used dev (freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed) dev ProgramName: lta_convert ProgramArguments: lta_convert -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_and ProgramArguments: mri_and -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_annotation2label ProgramArguments: mri_annotation2label -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_aparc2aseg ProgramArguments: mri_aparc2aseg -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_surf2volseg ProgramArguments: mri_surf2volseg -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_binarize ProgramArguments: mri_binarize -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_ca_label ProgramArguments: mri_ca_label -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_ca_normalize ProgramArguments: mri_ca_normalize -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_ca_register ProgramArguments: mri_ca_register -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_cc ProgramArguments: mri_cc -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_compute_overlap ProgramArguments: mri_compute_overlap -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:02-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_compute_seg_overlap ProgramArguments: mri_compute_seg_overlap -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_concat ProgramArguments: mri_concat -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_concatenate_lta ProgramArguments: mri_concatenate_lta -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 mri_convert -all-info ProgramName: mri_convert ProgramArguments: mri_convert -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_diff ProgramArguments: mri_diff -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_edit_wm_with_aseg ProgramArguments: mri_edit_wm_with_aseg -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_em_register ProgramArguments: mri_em_register -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_fill ProgramArguments: mri_fill -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_fuse_segmentations ProgramArguments: mri_fuse_segmentations -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_fwhm ProgramArguments: mri_fwhm -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_gcut ProgramArguments: mri_gcut -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_info ProgramArguments: mri_info -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_label2label ProgramArguments: mri_label2label -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_label2vol ProgramArguments: mri_label2vol -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_log_likelihood ProgramArguments: mri_log_likelihood -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_mask ProgramArguments: mri_mask -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_matrix_multiply ProgramArguments: mri_matrix_multiply -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_normalize ProgramArguments: mri_normalize -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_normalize_tp2 ProgramArguments: mri_normalize_tp2 -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_or ProgramArguments: mri_or -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_relabel_hypointensities ProgramArguments: mri_relabel_hypointensities -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_relabel_nonwm_hypos ProgramArguments: mri_relabel_nonwm_hypos -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_remove_neck ProgramArguments: mri_remove_neck -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 dev ProgramName: mri_robust_register ProgramArguments: mri_robust_register -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 dev ProgramName: mri_robust_template ProgramArguments: mri_robust_template -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_anatomical_stats ProgramArguments: mris_anatomical_stats -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_ca_label ProgramArguments: mris_ca_label -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_calc ProgramArguments: mris_calc -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 mris_convert -all-info ProgramName: mris_convert ProgramArguments: mris_convert -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_curvature ProgramArguments: mris_curvature -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_curvature_stats ProgramArguments: mris_curvature_stats -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_diff ProgramArguments: mris_diff -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_divide_parcellation ProgramArguments: mris_divide_parcellation -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_segment ProgramArguments: mri_segment -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_segstats ProgramArguments: mri_segstats -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_euler_number ProgramArguments: mris_euler_number -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_fix_topology ProgramArguments: mris_fix_topology -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_topo_fixer ProgramArguments: mris_topo_fixer -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_jacobian ProgramArguments: mris_jacobian -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_label2annot ProgramArguments: mris_label2annot -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_left_right_register ProgramArguments: mris_left_right_register -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_place_surface ProgramArguments: mris_place_surface -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mrisp_paint ProgramArguments: mrisp_paint -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_register ProgramArguments: mris_register -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_smooth ProgramArguments: mris_smooth -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_sphere ProgramArguments: mris_sphere -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_surface_stats ProgramArguments: mris_surface_stats -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_stats2seg ProgramArguments: mri_stats2seg -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_thickness ProgramArguments: mris_thickness -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_thickness_diff ProgramArguments: mris_thickness_diff -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_topo_fixer ProgramArguments: mris_topo_fixer -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_surf2surf ProgramArguments: mri_surf2surf -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_surf2vol ProgramArguments: mri_surf2vol -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_surfcluster ProgramArguments: mri_surfcluster -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mris_volmask ProgramArguments: mris_volmask -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_tessellate ProgramArguments: mri_tessellate -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_vol2surf ProgramArguments: mri_vol2surf -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_vol2vol ProgramArguments: mri_vol2vol -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_voldiff ProgramArguments: mri_voldiff -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: mri_watershed ProgramArguments: mri_watershed -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ProgramName: tkregister2 ProgramArguments: tkregister2_cmdl -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 mri_motion_correct.fsl dev mri_convert -all-info ProgramName: mri_convert ProgramArguments: mri_convert -all-info ProgramVersion: dev TimeStamp: 2025/09/03-11:07:03-GMT BuildTime: Jul 18 2025 19:06:08 BuildStamp: freesurfer-macOS-darwin_arm64-8.1.0-20250718-f30dfed User: lukasdiedrich Machine: MBP-von-Lukas.wlan.med.uni-goettingen.de Platform: Darwin PlatformVersion: 23.6.0 CompilerName: Clang CompilerVersion: 13.0.0 ####################################### GCADIR /Applications/freesurfer/8.1.0//average GCA RB_all_2020-01-02.gca GCASkull RB_all_withskull_2020_01_02.gca AvgCurvTif folding.atlas.acfb40.noaparc.i12.2016-08-02.tif GCSDIR /Applications/freesurfer/8.1.0//average GCS DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ####################################### /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1 \n mri_convert /Volumes/INTENSO/Projects/NeuroVR+/MRI/Nifti/NVR-1_nii/5_t1_tfl3d_sag_ti1090_fa9_tr2700_09mm_p2.nii.gz /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig/001.mgz \n if: Empty if. then: Command not found. mri_convert /Volumes/INTENSO/Projects/NeuroVR+/MRI/Nifti/NVR-1_nii/5_t1_tfl3d_sag_ti1090_fa9_tr2700_09mm_p2.nii.gz /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig/001.mgz INFO: This is an unsigned short. INFO: using NIfTI-1 sform (sform_code=2) reading from /Volumes/INTENSO/Projects/NeuroVR+/MRI/Nifti/NVR-1_nii/5_t1_tfl3d_sag_ti1090_fa9_tr2700_09mm_p2.nii.gz... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-0.997216, -0.0249756, 0.0702613) j_ras = (-0.0156171, 0.991296, 0.130721) k_ras = (0.0729146, -0.12926, 0.988926) writing to /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig/001.mgz... #-------------------------------------------- #@# T2/FLAIR Input Wed Sep 3 13:07:05 CEST 2025 /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1 \n mri_convert --no_scale 1 /Volumes/INTENSO/Projects/NeuroVR+/MRI/Nifti/NVR-1_nii/6_t2_space_sag_081x081x09mm_p2.nii.gz /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig/T2raw.mgz \n if: Empty if. then: Command not found. mri_convert --no_scale 1 /Volumes/INTENSO/Projects/NeuroVR+/MRI/Nifti/NVR-1_nii/6_t2_space_sag_081x081x09mm_p2.nii.gz /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig/T2raw.mgz INFO: This is an unsigned short. INFO: using NIfTI-1 sform (sform_code=2) reading from /Volumes/INTENSO/Projects/NeuroVR+/MRI/Nifti/NVR-1_nii/6_t2_space_sag_081x081x09mm_p2.nii.gz... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-0.997216, -0.0249756, 0.0702613) j_ras = (-0.0156171, 0.991296, 0.130721) k_ras = (0.0729146, -0.12926, 0.988926) writing to /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig/T2raw.mgz... #-------------------------------------------- #@# MotionCor Wed Sep 3 13:07:08 CEST 2025 Found 1 runs /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig/001.mgz Checking for (invalid) multi-frame inputs... Only one run found so motion correction will not be performed. I'll copy the run to rawavg and continue. \n cp /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig/001.mgz /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg.mgz \n \n mri_info /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg.mgz \n rawavg.mgz ======================================== Volume information for /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg.mgz type: MGH intent: MRI (0) dimensions: 224 x 288 x 288 voxel sizes: 0.900000, 0.902778, 0.902778 type: USHRT (10) fov: 260.000 dof: 1 xstart: -100.8, xend: 100.8 ystart: -130.0, yend: 130.0 zstart: -130.0, zend: 130.0 TR: 0.00 msec, TE: 0.00 msec, TI: 0.00 msec, flip angle: 0.00 degrees nframes: 1 PhEncDir: UNKNOWN FieldStrength: 0.000000 ras xform present xform info: x_r = -0.9972, y_r = -0.0156, z_r = 0.0729, c_r = -3.7943 : x_a = -0.0250, y_a = 0.9913, z_a = -0.1293, c_a = 26.8407 : x_s = 0.0703, y_s = 0.1307, z_s = 0.9889, c_s = -13.7359 talairach xfm : Orientation : LAS Primary Slice Direction: axial voxel to ras transform: -0.8975 -0.0141 0.0658 89.2764 -0.0225 0.8949 -0.1167 -82.7064 0.0632 0.1180 0.8928 -166.3725 0.0000 0.0000 0.0000 1.0000 voxel-to-ras determinant -0.733507 ras to voxel transform: -1.1080 -0.0278 0.0781 109.6130 -0.0173 1.0981 0.1448 116.4508 0.0808 -0.1432 1.0954 163.1962 -0.0000 -0.0000 -0.0000 1.0000 /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1 \n mri_convert /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg.mgz /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz --conform \n if: Empty if. then: Command not found. mri_convert /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg.mgz /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz --conform reading from /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg.mgz... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-0.997216, -0.0249756, 0.0702613) j_ras = (-0.0156171, 0.991296, 0.130721) k_ras = (0.0729146, -0.12926, 0.988926) volume geometry: valid : 0 extent : (256, 256, 256) voxel : ( 1.0000, 1.0000, 1.0000) x_(ras) : (-1.0000, 0.0000, 0.0000) y_(ras) : ( 0.0000, 0.0000, -1.0000) z_(ras) : ( 0.0000, 1.0000, 0.0000) c_(ras) : (-3.7943, 26.8407, -13.7359) shears : ( 0.0000, 0.0000, 0.0000) file : /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg.mgz changing data type from ushrt to uchar (noscale = 0)... MRIchangeType: Building histogram 0 1252 1000, flo=0, fhi=0.999, dest_type=0 Reslicing using trilinear interpolation writing to /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz... \n mri_add_xform_to_header -c /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/transforms/talairach.xfm /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz \n if: Empty if. then: Command not found. INFO: extension is mgz \n mri_info /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz \n orig.mgz ======================================== Volume information for /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz type: MGH intent: MRI (0) dimensions: 256 x 256 x 256 voxel sizes: 1.000000, 1.000000, 1.000000 type: UCHAR (0) fov: 256.000 dof: 1 xstart: -128.0, xend: 128.0 ystart: -128.0, yend: 128.0 zstart: -128.0, zend: 128.0 TR: 0.00 msec, TE: 0.00 msec, TI: 0.00 msec, flip angle: 0.00 degrees nframes: 1 PhEncDir: UNKNOWN FieldStrength: 0.000000 ras xform present xform info: x_r = -1.0000, y_r = 0.0000, z_r = -0.0000, c_r = -3.7942 : x_a = 0.0000, y_a = 0.0000, z_a = 1.0000, c_a = 26.8407 : x_s = -0.0000, y_s = -1.0000, z_s = 0.0000, c_s = -13.7359 talairach xfm : /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/transforms/talairach.xfm Orientation : LIA Primary Slice Direction: coronal voxel to ras transform: -1.0000 0.0000 -0.0000 124.2058 0.0000 0.0000 1.0000 -101.1593 -0.0000 -1.0000 0.0000 114.2640 0.0000 0.0000 0.0000 1.0000 voxel-to-ras determinant -1 ras to voxel transform: -1.0000 -0.0000 -0.0000 124.2058 0.0000 0.0000 -1.0000 114.2641 -0.0000 1.0000 -0.0000 101.1593 -0.0000 -0.0000 -0.0000 1.0000 lta_convert --inlta identity.nofile --src /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg.mgz --trg /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz --outlta /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg2orig.lta --subject NVR-1 if: Empty if. then: Command not found. dev --inlta: identity.nofile input LTA transform. --src: /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg.mgz src image (geometry). --trg: /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz trg image (geometry). --outlta: /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg2orig.lta output LTA. --s: NVR-1 subject name LTA read, type : 1 1.00000 0.00000 0.00000 0.00000; 0.00000 1.00000 0.00000 0.00000; 0.00000 0.00000 1.00000 0.00000; 0.00000 0.00000 0.00000 1.00000; setting subject to NVR-1 Writing LTA to file /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/rawavg2orig.lta... lta_convert successful. \n mri_synthstrip --threads 1 -i /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz -o /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/synthstrip.mgz \n if: Empty if. then: Command not found. Configuring model on the CPU Running SynthStrip model version 1 Input image read from: /Volumes/INTENSO/Projects/NeuroVR+/MRI/recon/NVR-1_recon/NVR-1/mri/orig.mgz Processing frame (of 1): 1 Killed Darwin MBP-von-Lukas.wlan.med.uni-goettingen.de 23.6.0 Darwin Kernel Version 23.6.0: Mon Jul 29 21:14:04 PDT 2024; root:xnu-10063.141.2~1/RELEASE_ARM64_T8122 arm64 recon-all -s NVR-1 exited with ERRORS at Wed Sep 3 13:10:49 CEST 2025 To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting