make_average_subject
Hi,
I'm still having problems with make_average_subject, when I type the folowing command line in:
>make_average_subject --debug --subjects 'subject1' 'subject2'..... --out PLP_average --no-symlink
echo ERROR: Flag $flag unrecognized.
echo ERROR: Flag --no-symlink unrecognized.
ERROR: Flag --no-symlink unrecognized.
echo $cmdline
echo .......
exit 1
exit 1
and when I try to view the results by
> tksurfer PLP_average lh inflated
I get the message:
surfer: current subjects dir: /disc2/Kate/Flatmap1
surfer: not in "scripts" dir ==> using cwd for session root
surfer: session root data dir ($session) set to:
surfer: /disc2/Kate/Flatmap1
surfer: ### Could not find anatomical header information.
The mri folder does not contain the same files that the tutorial example subject 'buckner fsaverage' does, what do you think is going wrong? Thanks for your help
Best wishes
Carolyn
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 In order to help us help you, please follow the steps in: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting