Hi Peng

 

I think 'lh.BA3b_exvivo.label' is the label you want. The _exvivo just means that the data that went into the prediction was acquired on ex vivo brains.

Cheers

Bruce

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Peng Liu
Sent: Wednesday, June 24, 2020 7:38 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Brodmann area labels

 

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Dear Freesurfer experts,

 

I was trying to perform some ROI analysis with results obtained from recon-all. However I noticed that after recon-all, the labels created were like 'lh.BA3b_exvivo.label', whereas the labels I would want to create are like 'lh.BA3b.label'.

 

I have tried mri_annotation2label command, but the results I got were not as wanted either.

 

Does anyone know how to create labels like 'lh.BA3b.label'?

 

Any help would be appreciated a lot!

 

Many Thanks

 

PL

--------------------------------------------

Otto-von-Guericke University Magdeburg

 

Peng Liu, PhD Candidate

 

Institut für Kognitive Neurologie und Demenzforschung (IKND)

Otto-von-Guericke Universität Magdeburg

Deutsches Zentrum für Neurodegenerative Erkrankungen e.V. (DZNE)

 

Leipziger Str. 44| Haus 64| Raum 217

39120 Magdeburg, Deutschland

 

Phone: +49 391 67 25074