Dear Freesurfer users,
I made a brain registration of several subjects to the template cvs_avg35_inMNI125 using mri_csv_register and now I would like to visualize the results of the alignment.
I want to compare the surfaces of the subject before (subj/surf/lh.sphere) and after alignment (subj/surf/lh.cvs.to_cvs_avg35_inMNI125.sphere.reg) and of the template (cvs_avg35_inMNI125/surf/lh.sphere), overlayed with the curvature data (lh.curv) or the sulc data (lh.sulc).
What is the best way to get this in FreeSurfer? I tried with Freeview, tksurfer and tkregister2 but I did not find anything that makes the comparison really practical and evident. Maybe there is a combination of flags/options that I do not know.
By the way, an image like Figure 2 of Fischl's paper "High-Resolution Intersubject Averaging and a Coordinate System for the Cortical Surface", where the aligned sphere and the template sulci are overimposed, is what I am really looking for, so something like this would be very cool!
Cheers,
Marco