External Email - Use Caution
Dear Freesurfer's experts,
Havng done multiple types of manual editing in two subjects, I relaunched the recon-all process (Freesurfer 6.0.1) with the flag "-make all".
However, during the process, I goth for both subjects the
following error message:
make: *** [/netapp/vol2_agewell/pro/IMAP/imap_mvh/FS6.0.1/awellv1s097/mri/aseg.presurf.mgz] Error 1
recon-all -s
/netapp/vol2_agewell/pro/IMAP/imap_mvh/FS6.0.1/awellv3s024
-ccseg
ERROR: Flag -ccseg unrecognized.
Following the troubleshooting site (https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/TroubleshootingDataV6.0) I have over-writed the "recon-all.makefile" file since I use the 6.0.1 version of Freesurfer.
Thanks for helping.
Best,
Matthieu