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mri_glmfit-sim --glmdir a_glm_results/lh.thickness.velocity.10.glmdir \

--cache 1.3 abs \

--cwp 0.05 \

--2spaces

INFO: unrecognized mri_glmfit cmd option doss

 ... probably not a problem

SURFACE: fsaverage lh

log file is a_glm_results/lh.thickness.velocity.10.glmdir/cache.mri_glmfit-sim.log

cd /Users/narlonsilva/Desktop/freesufer_subjects

/Applications/freesurfer/7.1.1/bin/mri_glmfit-sim

--glmdir a_glm_results/lh.thickness.velocity.10.glmdir --cache 1.3 abs --cwp 0.05

FreeSurferEnv.csh 7.1.1

Mon Jul 26 10:02:49 EDT 2021

Darwin Narlons-MacBook-Pro.local 20.4.0 Darwin Kernel Version 20.4.0: Thu Apr 22 21:46:47 PDT 2021; root:xnu-7195.101.2~1/RELEASE_X86_64 x86_64

narlonsilva

setenv SUBJECTS_DIR /Users/narlonsilva/Desktop/freesufer_subjects

FREESURFER_HOME /Applications/freesurfer/7.1.1

Original mri_glmfit command line:

cmdline mri_glmfit --y a_cat_data/lh.thickness.velocity.10.mgh --fsgd a_fsgd/velocity.fsgd doss --C a_contrasts/velocity_sex_age.mtx --surf fsaverage lh --cortex --glmdir a_glm_results/lh.thickness.velocity.10.glmdir

DoSim = 0

UseCache = 1

DoPoll = 0

DoPBSubmit = 0

DoBackground = 0

DiagCluster = 0

gd2mtx = doss

fwhm = 1240.684619

ERROR: cannot find /Applications/freesurfer/7.1.1/average/mult-comp-cor/fsaverage/lh/cortex/fwhm1241/abs/th13/mc-z.csd