Hi Marcus,

I don't think that anyone is supporting the old freediffusion stream anymore. You can try dt_recon (note it is not "dtrecon"). Run with --help to get more info.

doug

Marcus Belke wrote:
Hi

we are currently working on the DTI data and we are
trying to
get the mc-step running using diff-flirt. it does not
work, although 
the unpacking and the dtrecon seem to work fine.
I have attached the log-file and copied the error
message at the
bottom.
Can anyone help?
Thanks a lot!
Best regards,
Marcus




-------- ERROR MESSAGE--------
...
...
Registering volume 1
flirt -in ./tmp/diff-flirt-8311/f-001.img -ref
./tmp/diff-flirt-8311/f-000.img -out
./tmp/diff-flirt-8311/f-001.img
-omat ./tmp/diff2diff-001.mat -verbose 3 -dof 12
-searchrx -15 15
-searchry -15 15 -searchrz -15 15 -cost mutualinfo
-searchcost
mutualinfo -bins 256



WARNING!!!! Multiple image files detected:
./tmp/diff-flirt-8311/f-000.nii.gz
./tmp/diff-flirt-8311/f-000.img
./tmp/diff-flirt-8311/f-000.hdr

STOPPING PROGRAM
ERROR: flirt failed with status 1


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