Hi Alan - Try removing the "\" character from the end of the dcmlist definition. That's a change of line character.

a.y

On Wed, 7 Aug 2013, Alan Francis wrote:

Hi Anastasia:

Here is the trac-all log. Please find attached the dmrirc file.

csh::alanf@cerebro [/autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons] : trac-all -prep
-c /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/dmrirc-107

Too many ('s.
ERROR: must specify as many DWI dicoms as subjects

Thank you so much.

Alan


On Wed, Aug 7, 2013 at 12:32 PM, Anastasia Yendiki <ayendiki@nmr.mgh.harvard.edu> wrote:

      Yes, please attach the dmrirc and trac-all.log. Thanks!

      a.y

      On Wed, 7 Aug 2013, Alan Francis wrote:

            Hi Anastasia:

            For one brain I got this error message :

            csh::alanf@cerebro
            [/autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons] : trac-all
            -prep
            -c /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/dmrirc-107

            Too many ('s.
            ERROR: must specify as many DWI dicoms as subjects

            I tried specifying the exact number of DWI dicoms but it is not working. Should I send you my
            dmrirc for this brain?

            thanks,

            Alan




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