Hi Damien,

please be sure to check with our wiki page on there recommended way to run submillimeter recons with v6. 
https://surfer.nmr.mgh.harvard.edu/fswiki/SubmillimeterRecon
It is still work in progress, and the described procedure may slightly change, so it’s worth checking with this page every now and then.

Good luck!
Natalia 


On 06 Oct 2016, at 14:01, Damien MARIE <damien.marie@unige.ch> wrote:

Dear experts,

I plan to process some MRI 7T data, 0.6 mm^3 isotropic voxel size. The aim is to look a R1 maps.

I was wondering what was your opinion concerning the downsampling to 1 mm^3 (performed by the current FreeSurfer version if I am correct). What do you think would be the best: FreeSurfer 5.3 , FreeSurfer 5.3-HCP or FreeSurfer beta 6.0?

Thank You and Best,

Damien

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