From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Huang, Yujing <YHUANG43@mgh.harvard.edu>
Date: Tuesday, February 11, 2025 at 13:38
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [EXTERNAL] Re: [Freesurfer] Recon-all error - release 8.0.0-beta

The new version will be announced  in the next couple of days.

 

 

        External Email - Use Caution        

Hello Yujing,

 

Thank you for your response.

 

“There are no details of the error message in the log.”

 

In the terminal the error message is:

2 root error(s) found.

  (0) INVALID_ARGUMENT:  input must be 4-dimensional[1,72,72,72,24]

                [[{{node unet/unet_bn_down_0/FusedBatchNormV3}}]]

                [[unet/unet_bn_down_0/FusedBatchNormV3/_16]]

  (1) INVALID_ARGUMENT:  input must be 4-dimensional[1,72,72,72,24]

                [[{{node unet/unet_bn_down_0/FusedBatchNormV3}}]]

0 successful operations.

0 derived errors ignored. [Op:__inference_predict_function_1146]

ERROR:

Darwin r5523400.mayo.edu 24.3.0 Darwin Kernel Version 24.3.0: Thu Jan  2 20:24:22 PST 2025; root:xnu-11215.81.4~3/RELEASE_ARM64_T6041 arm64

 

recon-all -s sub-01 exited with ERRORS at Tue Feb 11 13:12:04 CST 2025

I can’t see any other information, Only the log that I attached in the las email and the info in the terminal.

I attached the terminal text.

 

Does your error look something like this?

  (0) INVALID_ARGUMENT:  input must be 4-dimensional[1,72,72,72,24]

                [[{{node unet/unet_bn_down_0/FusedBatchNormV3}}]]

                [[unet/unet_merge_4/concat/_64]]

  (1) INVALID_ARGUMENT:  input must be 4-dimensional[1,72,72,72,24]

                [[{{node unet/unet_bn_down_0/FusedBatchNormV3}}]]

 

Yes it is.

 

If so, we fixed the error in the coming FS 8.0 release.

Just I used this version, is there other release? How can I have the fixed release?

 

Thank you,

 

Lupita