Hi,<br><br>I am using freesurfer to process subjects with WM lesions. My data is axial and my lesion masks are in this space. I wanted to use the lesion mask to correct wm.mgz to improve the cortical surfaces. to perform this I tried to use <br>
<br>mri_convert lesion.mgz  lesion_FS_spance.mgz --conform<br clear="all"><br>It takes the lesion mask to the desired space, however it used linear interpolation, I need nearest neighbor interpolation. I could not find a flag for specifying the interpolation type in mri_convert.  Would you please help me with this?<br>
<br>Thanks,<br clear="all"><br>-- <br>Navid Shiee<br>Ph.D. Candidate<br>Laboratory of MEDical Image Computing (MEDIC)<br>Image Analysis and Communication Laboratory (IACL)<br>Johns Hopkins University<br>