Hi Doug,

Thanks for the clarification. According to the PetSurfer guide, it is stated that there are “ways to customise this segmentation to use ROI definitions”. How may I go about doing that? Appreciate your help.

Best Wishes,
Elijah 

Dr. Elijah Mak, Research Associate
Department of Psychiatry
Old Age Psychiatry Group | Cambridge Intellectual & Developmental Disabilities Research Group
University of Cambridge,
Trinity College, CB21TQ, UK


On 12 September 2017 at 17:27:10, Douglas N Greve (greve@nmr.mgh.harvard.edu) wrote:

what do you mean? You can only get gtm stats from the parcellations that
you have used during the process. You can't get new values at the end.
If you want to use different ROIs, then you need to run gtmseg again
with a different parcellation, then run mri_gtmpvc with the new gtmseg


On 09/12/2017 10:42 AM, Elijah Mak wrote:
> Hi Doug,
>
> Would it be possible to use the gtmstats2table command to extract GTM
> values from other parellations?
>
> Thanks!
>
> Best Wishes,
> Elijah
>
>
> *Dr. Elijah Mak, Research Associate
> *Department of Psychiatry
> Old Age Psychiatry Group | Cambridge Intellectual & Developmental
> Disabilities Research Group
> University of Cambridge,
> Trinity College, CB21TQ, UK
> http://www.neuroscience.cam.ac.uk/directory/profile.php?fkm24
>
>
>
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