External Email - Use Caution        

Hi King-Wai/ Chiara

Thank you for your excellent suggestions.

Chiara: I have made the changes you suggested. Can you please check if the config file looks workable?

King-Wai - I made the change you suggested. But the problem still persists. I have attached the config file.

best,

Alan

On Tue, Jul 18, 2023 at 12:26 PM King-Wai Chu <kingwai.chu@gmail.com> wrote:
Hi Alan,

I think in your "set dcmlist", you are missing
/home/alanfrancis/IMAGING/DTI/
before 109123
It should be
set dcmlist = /home/alanfrancis/IMAGING/DTI/109123/109123_7T_DWI_dir72_AP_SBRef.nii.gz

Best,

King-Wai

On Tue, Jul 18, 2023 at 12:59 PM Alan Francis <alandarkenergy@gmail.com> wrote:
Hi King-Wai:

I have been running Tracula on 7T images and it keeps giving me an error. The error is as follows:

copernicus:~/IMAGING/DTI> trac-all -prep -c dmrirc-109123_7T_2
Unmatched '"'.

I have attached my config file. Can you please let me know what I am doing wrong?

Thanks,

Alan
--
|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|

Alan N. Francis PhD
Assistant Professor of Neuroscience
Institute of Neuroscience
University of Texas, School of Medicine
Rio Grande Valley
Texas.
                                                                                                          


--
King-Wai Chu, Ph.D.
Program Analyst
Mental Illness Research, Education and Clinical Center (MIRECC, VISN3)
James J. Peters Dept. of Veterans Administration Medical Center (OOMH)
130 W. Kingsbridge Road
Bronx, NY 10468


--
|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|

Alan N. Francis PhD
Assistant Professor of Neuroscience
Institute of Neuroscience
University of Texas, School of Medicine
Rio Grande Valley
Texas.