Hi all,

I am receiving the same error, using the same version of Freesurfer (freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0). 

Was a solution found?

Andrew

On Mon, Nov 2, 2015 at 3:31 AM, Shani Ben Amitay <shani.holzer@gmail.com> wrote:

Dear Lilla and freesurfers,

I hvae tried to rub the mri_CVS_register and got the following error:

VolumeMorph load - failed to open input stream.

I'm using freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0

Any idea how to fix this>

Log file atttached

Thanks!

Shani

On Fri, Oct 30, 2015 at 11:17 PM, Lilla Zollei <lzollei@nmr.mgh.harvard.edu> wrote:

Hi Shani,

Sure. You can do

mri_cvs_register --help

and that should give you lots of information.

Alternatively you can also go to https://surfer.nmr.mgh.harvard.edu/fswiki/mri_cvs_register

and read through the presentation that we give at the FS course:
http://surfer.nmr.mgh.harvard.edu/pub/docs/fs.registration.ppt

Best, Lilla

On Fri, 30 Oct 2015, Shani Ben Amitay wrote:

Hello
Can you please direct me to more information about the CVS.
Thanks!
Shani

בתאריך 30 באוק' 2015 14:39, "Bruce Fischl" <fischl@nmr.mgh.harvard.edu> כתב:
      Hi Shani

      you can use mri_vol2vol with the talairach.m3z. Alternatively, you can run CVS which will give you more accurate cortical matching and use the transform that it produces.

      cheers
      Bruce
      On Fri, 30 Oct 2015, Shani Ben Amitay wrote:

            Dear freesurfers,
            I would like to know what will be the best way to bring volumes in the
            individual subject's space  to the fsaverage space.

            Thanks, 
            Shani


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The information in this e-mail is intended only for the person to whom it is
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