Hello all

 

I’m running the recon-all tool :    recon-all -all -sd .   -subjid  FS    -i   ${subj}_T1_al.nii

It works fine, but at some point, the program stops and asks at the terminal:

 

writing to orig_nu.mgz...

rm: descend into write-protected directory './tmp.mri_nu_correct.mni.41843'? y

rm: remove write-protected directory './tmp.mri_nu_correct.mni.41843'? y

 

and I have to answer “y”,

but if I’m not checking it just sits and waits and take so much time…

 

do you have any idea what might case that?

I have all the permissions on the directories.

 

Best

Patrick