Thanks. I have attached the error output when using the debug option when attempting to run a subject. When I type from the command line (no --feat or --subject options), it is an identical error:

[edub@longleaf-login1 Freesurfer]$ reg-feat2anat --debug

: Command not found.

reg-feat2anat @FS_VERSION@

: Command not found.

Erin Walsh, Ph.D.

Assistant Professor

University of North Carolina-Chapel Hill

Department of Psychiatry

Chapel Hill, NC 27599-3367

erin_walsh@med.unc.edu

pronouns: she/her

From: Douglas N. Greve <dgreve@mgh.harvard.edu>
Sent: Friday, November 13, 2020 12:01 PM
To: Walsh, Erin <erin_walsh@med.unc.edu>; freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: tkregister issue with reg-feat2anat

I'm sure they will. When you re-run it, add --debug as the first argument and capture the entire terminal output to a file (don't try to take a snapshot)

On 11/13/2020 11:50 AM, Walsh, Erin wrote:

External Email - Use Caution

Not presently, as I would need to install on my personal computer. I can ask HPC IT to replace the file again and retest to see if things replicate...

Erin

From: Douglas N. Greve <dgreve@mgh.harvard.edu>
Sent: Friday, November 13, 2020 11:48 AM
To: Walsh, Erin <erin_walsh@med.unc.edu>; freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: tkregister issue with reg-feat2anat

Can you run it outside of the HCP?

On 11/13/2020 11:27 AM, Walsh, Erin wrote: