Hi all,
Any update on this issue?  At present, I’m not able to use mri_cvs_register as a result of the problem (several other programs also require this library).

Best,
Matt

 

From: Hoptman, Matthew
Sent: Tuesday, June 18, 2013 9:01 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: libboost_program_options.so.5 issue

 

Hi all,
Any news on the libboost_program_options.so.5 issue, as relates to mri_cvs_register?  I've encountered it using mris_resample (as part of mri_cvs_register) using.

When I run:

qsub -S /bin/tcsh -pe make 2 -b y -v PATH=${FREESURFER_HOME}/bin:$PATH -V ${FREESURFER_HOME}/bin/mri_cvs_register --mov ${subject}

 

where ${subject} was found by looping through all of my subjects

 

I get the error:

mris_resample: error while loading shared libraries: libboost_program_options.so.5: cannot open shared object file: No such file or directory

 

bugr gives me:

----------------------------------------------------------------

FREESURFER_HOME: /home/hoptman/freesurfer

Build stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0beta

Debian version: 6.0.4

Kernel info: Linux 2.6.32-5-amd64 x86_64

 

Thanks,
Matt

Matthew J. Hoptman, PhD
Research Scientist V
Nathan S. Kline Institute for Psychiatric Research

Research Associate Professor in Psychiatry
NYU School of Medicine

 

IMPORTANT NOTICE: This e-mail is meant only for the use of the intended recipient. It may contain confidential information which is legally privileged or otherwise protected by law. If you received this
e-mail in error or from someone who was not authorized to send it to you, you are strictly prohibited from reviewing, using, disseminating, distributing or copying the e-mail.

PLEASE NOTIFY US IMMEDIATELY OF THE ERROR BY RETURN E-MAIL AND DELETE THIS MESSAGE FROM YOUR SYSTEM. Thank you for your cooperation.

 


Conserve Resources. Print only when necessary.

IMPORTANT NOTICE: This e-mail is meant only for the use of the intended recipient. It may contain confidential information which is legally privilegedor otherwise protected by law. If you received this e-mail in error or from someone who is not authorized to send it to you, you are strictly prohibited from reviewing, using, disseminating, distributing or copying the e-mail. PLEASE NOTIFY US IMMEDIATELY OF THE ERROR BY RETURN E-MAIL AND DELETE THIS MESSAGE FROM YOUR SYSTEM. Thank you for your cooperation.

IMPORTANT NOTICE: This e-mail is meant only for the use of the intended recipient. It may contain confidential information which is legally privileged or otherwise protected by law. If you received this e-mail in error or from someone who is not authorized to send it to you, you are strictly prohibited from reviewing, using, disseminating, distributing or copying the e-mail. PLEASE NOTIFY US IMMEDIATELY OF THE ERROR BY RETURN E-MAIL AND DELETE THIS MESSAGE FROM YOUR SYSTEM. Thank you for your cooperation.