Bruce,
    Thank you for such a quick response. I have attached a link to the T1 dicom files. The T1 was acquired using an MP rage sequence.


Thanks,
Ben (University of Minnesota, Noam Harel's Lab)

On Tue, Oct 6, 2015 at 11:45 AM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
Hi Ben

if you upload the datasets we will take a look. I imagine this is due to
dielectric resonance effects. What sequence did you use?

Bruce
On Tue, 6 Oct 2015,
Benjamin Peterson wrote:

> We have three 7T scans of the same person done on separate days. After
> running all three T1 images using the "recon-all" function, we obtain
> thalamic volumes. The volumes varied by up to 25% which seems quite drastic
> for the same person. Is there a way to decrease this variability? Are there
> some parameters to change for 7T? Would the subcortical segmentation work
> better with a T2 or DTI image?
> Thanks in advance,
> Ben
>
>
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