I am doing manual edits on the brainmask.mgz, wm.mgz, and brain.finalsurfs.manedit.mgz volumes and adding control points. What autorecon flag or from which stage of processing should I rerun recon-all such that all of these manual edits are respected? 

Thanks,

Jason

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Jason A. Tourville, Ph.D.
Research Assistant Professor
Department of Speech, Language,
and Hearing Sciences
Boston University
677 Beacon St.
Boston, MA 02215
Phone: (617)353-9484
Fax: (617)353-7755