External Email - Use Caution        

Dear Bennet and Paul,


Thank you very much for your feedback.


Yes, I am running on a cluster. I may have to try again with different settings. 


Thank you again for your advise.


Best regards,

Krystal

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Bennet Fauber <bennet@umich.edu>
Sent: 14 April 2023 00:12:15
To: Freesurfer support list
Subject: Re: [Freesurfer] [FreeSurfer] Error: mri_ca_register with non-zero status 143
 
        External Email - Use Caution       

It may also be the same signal if the operating system could not
allocate memory,  I believe.


On Thu, Apr 13, 2023 at 11:11 AM Wighton, Paul <PWIGHTON@mgh.harvard.edu> wrote:
>
>         External Email - Use Caution
>
> Hi Krystal,
>
> I think the culprit is the line "Command terminated by signal 15".  Signal 15 (SIGTERM) is a request that has been send to the program to terminate.  So someone or something has requested a termination.  Are you running this on a cluster?  Is it possible that the job exceeded it's maximum runtime?
>
> -Paul
>
> ________________________________________
> From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Krystal Xiwing Yau <krystaly@hku.hk>
> Sent: Thursday, April 13, 2023 3:02 AM
> To: freesurfer@nmr.mgh.harvard.edu
> Subject: [Freesurfer] [FreeSurfer] Error: mri_ca_register with non-zero status 143
>
>         External Email - Use Caution
>
> Dear FreeSurfer experts,
>
>
> I am running recon-all for an MS patient but the process was exited with error as described in the title of this email. The attached file is the log file for your reference.
>
> The below T1 image looks fine too:
>
>
> [cid:18540d76-7d70-4831-a4cc-ab3762da93b2]
>
>
> It's generated from a 3T scanner, Siemen.
>
>
> Would someone kindly advise on how to fix the issue? Thank you so much in advance.
>
>
> Regards,
> Krystal
>
> Tel.: +852 2255 5024
> Fax: +852 2872 5828
> Address: Room 304, 3/F, New Clinical Building, 102 Pokfulam Road, Hong Kong.
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