Hello,

As I understand, adding the -no-isrunning flag will cause recon-all to ignore the 'isrunning.pial' file.

I previously interrupted recon-all (while it was in the middle of a process) and I have now begun to re-run my subjects using this flag.

I just wanted to check that any data which has previously been generated by freesurfer will now be overwritten. I.e. that there are no disadvantages to using this flag?

Thanks ,

Joe